EMAGE mouse gene expression spatial database

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EMAGE:10800

Mboat7 membrane bound O-acyltransferase domain containing 7 ( MGI:1924832)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_001216. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_001216_01	euxassay_001216_02	euxassay_001216_03	euxassay_001216_04

euxassay_001216_05	euxassay_001216_06	euxassay_001216_07	euxassay_001216_08	euxassay_001216_09

euxassay_001216_10	euxassay_001216_11	euxassay_001216_12	euxassay_001216_13	euxassay_001216_14

euxassay_001216_15	euxassay_001216_16	euxassay_001216_17	euxassay_001216_18	euxassay_001216_19

euxassay_001216_20	euxassay_001216_21	euxassay_001216_22	euxassay_001216_23	euxassay_001216_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

10800_wholemount_strong.wlz

10800_wholemount_moderate.wlz

10800_wholemount_weak.wlz

10800_wholemount_possible.wlz

10800_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:10800_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

submandibular gland primordium

weak

regional

weak expression: see section 06 07 08 09 10 16 17 18 19

Annotation Validation:

spatial mapping by EMAGE editor, text annotation by author

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T4689
Entity Detected:	Mboat7, membrane bound O-acyltransferase domain containing 7 ( MGI:1924832)
Sequence:	sense strand is shown >T4689 GGGACCTCCTAGAAAGATCGCGACAGGCATCTTGCGGCAGACTGGTGTTCTGGGTACCTTTCTTGCGGTG CTGTAACTCGTACAGCCGCGGCTCTCGGGGCCTGGACCGCGCAGCCCTGCCGGCGCCGTCCAGAACGGGC AGTGCGGGGGCGTGCTGAGCTGGGGAGGCGTGGCGCGAGCCGAGGCGGCCTCGAAAAGGAGCTCCGCAGT TTTCTGGCCCACGGACGGTTCAGACCATGACACCCGAAGAATGGACATATCTAATGGTCCTTCTTATCTC CATCCCTGTTGGCTTCCTCTTTAAGAAAGCTGGACCTGGGCTGAAGAGATGGGGGGCAGCAGCTGTGGGC CTGGGGCTCACCTTATTCACCTGTGGCCCCCACAGTTTGCATTCTCTGATCACCATCTTGGGAACCTGGG CCCTCATTCAGGCCCAGCCCTGCTCCTGCCATGCCCTGGCTCTTGCCTGGACCTTCTCCTATCTCCTCTT CTTCCGAGCCCTCAGCCTGCTGGGCCTGCCCACTCCCACGCCCTTCACCAATGCTGTCCAGCTGCTGTTG ACACTGAAGTTGGTGAGTCTAGCTAGTGAAGTCCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGCCT CCGGCTTCCACAAGGAGCCTACGCTGGGCCTCCTCCCTGAGGTCCCCTCTTTGATGGAGACACTCAGCTA TAGCTACTGTTACGTGGGAATCATGACAGGCCCATTCTTCCGCTACCGCACCTACCTGGATTGGCTGGAA CAGCCCTTCCCGGAAGCCGTGCCCAGCCTGAGGCCCCTGCTGCGCCGCGCCTGGCCAGCCCCGCTCTTTG GCCTGCTCTTCCTGCTGTCCTCCCATCTCTTCCCACTGGAAGCTGTGCGTGAGGACGCCTTCTACGCCCG CCCGCTGCCCACCCGCCTCTTCTACATGATCCCGGTCTTCTTCGCCTTCCGCATGCGCTTCTACGTTGCC TGGATTGCGGCCGAGTGCGGTTGCATTGCCGCGGGCTTCGGGGCCTACCCTGTGGCTGCCAAAGCCCGGG CCGGGGGCGGCCCCACCCTCCAATGCCCACCCCCTAGCAGTCCGGAGATTGCAGCTTCCCTGGAGTATGA CTATGAGACCATCCGTAACATCGACTGCTATGGCACAGACTTCTGCGTGCGTGTGCGGGATGGCATGCGA TACTGGAACATGACCGTGCAGTGGTGGCTGGCACAGTACATCTACAAGAGCGCACCTTTCTGCTCCTACG TTTTGAGGAGTGCCTGGACCATGCTGTTGAGTGCCTACTGGCATGGCCTCCACCCTGGTTACTACCTAAG CTTCATGACCATCCCGCTGTGCCTGGCTGCTGAGGGCTATTTGGAGTCAGCCTTGCGGAGACACCTGAGC CCCGGGGGCCAGAAAGCCTGGGACTGGGTCCACTGGTTCCTGAAGATGCGTGCCTACGACTACATGTGCA TGGGCTTTGTGCTCCTTTCCATGGCTGACACACTCCGGTACTGGGCCTCCATCTACTTCTGGGTCCACTT TCTAGCCCTGGCCTGCTTGGGGCTGGGGCTGGTTTTGGGTGGGGGCAGCCCCAGCAAGAGGAAGACACCA TCCCAGGCTACCAGCAGCCAAGCGAAGGAAAAGCTCCGGGAAGAGTGAGCTCTGCTGCATTGGCCTGCCT TCCAGTTCAAGCTTTTTTGGGAATTCCATGAACCAGGCTGTTTGTTTGGGGTTTTTGTTTGTTTGTTTGT TTGTTTCCTTTACCCAGCAAGAATCCCTTGTTTGGCTAAGAGCCTGGAGAGGATTCCCTCTTCCCAAATA ATTCCTCTGCCTTCTATTTAAAGCTAAGGTATCCTTCTCTTGGGCTCTCTCAGCATCTTGACCTTTTCAG ACCTTCCTCTGCTAACATCAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGA TGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACAGAC TCCCAGTGGGTCCCCAGTATGGGGGCAGGAACTTCAGGGCCAGGTTCTGGGAGAGGGGAGGGATAGCCTT CTTGTTTTCCTCTTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGAAGGA GAAGCTAAAATGTGAGAAGCCCCAGGGGAGCTTGCTCTTACAGCAGCTTCTGCCTGAGCCATTTCTGGGC TCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCTGTGACAGGCCAGAATGTATAAAGCTTTCCCAA TAAAGTGTTACACATGCAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:5028759 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5028759 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	MGI:4826121 same experiment
	EurExpress:euxassay_001216 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source