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EMAGE:11644

Txnl4b thioredoxin-like 4B ( MGI:2443724)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644
euxassay_008419_01 euxassay_008419_02 euxassay_008419_03 euxassay_008419_04 euxassay_008419_05
EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644
euxassay_008419_06 euxassay_008419_07 euxassay_008419_08 euxassay_008419_09 euxassay_008419_10
EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644
euxassay_008419_11 euxassay_008419_12 euxassay_008419_13 euxassay_008419_14 euxassay_008419_15
EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644 EMAGE:11644
euxassay_008419_16 euxassay_008419_17 euxassay_008419_18 euxassay_008419_19 euxassay_008419_20
EMAGE:11644 EMAGE:11644
euxassay_008419_21 euxassay_008419_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11644Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11644_wholemount_strong.wlz
11644_wholemount_moderate.wlz
11644_wholemount_weak.wlz
11644_wholemount_possible.wlz
11644_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11644_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9464
Entity Detected:Txnl4b, thioredoxin-like 4B ( MGI:2443724)
Sequence:sense strand is shown

>T9464
TTACCATTCTGATGTTGGAGCGGCCGCCTGCGTCCTCTTTTTTTTTTTTTTTTTTTTTCCTGTCGGAGGA
AGCGTTTCTAAGGATACAGCCCAGGACCCACGCACTTCATCTCAGCAGCCTTTAGACACTGCAGAATTGA
TAGTGCGGACTAGCATTGGACTTTTTCAAGATGAGCTTCCTCTTGCCCAAACTGACCAGCAAGAAAGAAG
TAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTGTTGGTTCTCAGGTTTGGGAGGGACGAGGACCCCGT
CTGTCTGCAGCTGGATGATATTCTCTCAAAAACTTCAGCCGACCTGAGTAAAATGGCTGCTATTTACCTG
GTGGACGTGGACCACACGCCGGTTTACACACAGTATTTTGACATCAGTTACATTCCCTCTACCGTATTTT
TCTTCAATGGGCAGCACATGAAGGTGGATTATGGGTCTCCGGATCACACTAAATTCGTAGGAAGCTTCAA
AACCAAACAAGACTTCATAGATTTGATTGAAGTCATCTACCGGGGAGCGATGAGGGGAAAACTTATTGTC
CAGAGTCCTATTGATCCCAAGAACGTGCCCAAATATGACCTCCTCTATCAAGACATTTAACACACTGCTG
TTGGAGCTGAGAGAAGCACAGGTTGAGACGGGGCCTGAAGCCAGAGGGCCTGTGGTCTGGAGTCCTTCAG
AGACATGTTCACTGCCTGAGCAAAGAGGTTTGCGGTGTCTGTAATCAGCAGCCCTTTTGCAGCAGCCCCA
GTGCTCCAAGAATCAGGATGCCTGAGCGTCCCTTCCCTGAGAGCCTCACAGCAGTGAGGCAGGAGCCCAA
GTGGTGCCTGTTCGTGACTTCCGTTTATCTTGACTTTGCTTTACCCCTCAAGGTCAGGCGTCCTCCTAGA
CGCTGTGAGAACAGCTTGCTCTGCCATGTTTGTGCACACGTTCTCCCCCATGCCTCCGTTCTCTTGCCCC
TTCTGCCCCCTCCTACCCCAGCTTATCTTGAACTAACTAATAATTAGATGCAGGTGAGTTCATGGTTTCC
TCGCAGTCTGAAAGCAGTACCCTGTCCACGTGTTTATAGCCATCCGGCCATTGATTGCCAGGAGAAAAGT
GTGGCTCTTCACCATCCAGCACGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAGGGACAGAGCTCCCC
AGAAAGCACTGCCACCACCCATTACCTCAAGGACTAAAGACCAAAAGGATATCAGGTTGTTAAGGGAGAA
ACGCCTTGAGGGGTTTGCGATTCCATCCAAGGGCTTTTGAAGAATGTGACCCAACCTCAGGAAACTTGTG
TTTCTCCTAAGCCTTATGGGAGTGGTTGTCCCTGTCGCTCTGGAATGAGAGCAGGTACAGAGCTGGAGGG
CCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAGCAGAGGCCCAGGTGTGCAG
GAGGCAGGGCCAACCCTGGCATCAGCTGCTTATTTCTAAGCTTGTCCTTTAGGGGAAAGTGAAACCACGA
CCTGAATCTGGCAGACGGGGCGCAGAAAGAAGATGGTTTGGGTTTTCCGTGTCCTCTGCCCAAAGCTGAG
AGCTGCTTCAGGGATGGGCAGAGAACCTTTTCCCACCACCTCCTTAGGATGCACGGGGCTATGGCAGCCA
CCCTGGACACGTGGATGAAAACTTCGAGATTCTAAGAGTCAGATCCCTAATGCTACTGAAGTCCTAGGTG
AACAATAAATGTTCCTCCACATCCCTATGGTGGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30541506 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30541506 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11642 same embryo
 EMAGE:11640 same embryo
 EMAGE:11643 same embryo
 EMAGE:11639 same embryo
 EMAGE:11641 same embryo
 EurExpress:euxassay_008419 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS