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EMAGE:14141

Pglyrp2 peptidoglycan recognition protein 2 ( MGI:1928099)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141
"Pseudo-wholemount" of euxassay_001825. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001825_01 euxassay_001825_02 euxassay_001825_03 euxassay_001825_04
EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141
euxassay_001825_05 euxassay_001825_06 euxassay_001825_07 euxassay_001825_08 euxassay_001825_09
EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141
euxassay_001825_10 euxassay_001825_11 euxassay_001825_12 euxassay_001825_13 euxassay_001825_14
EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141 EMAGE:14141
euxassay_001825_15 euxassay_001825_16 euxassay_001825_17 euxassay_001825_18 euxassay_001825_19
EMAGE:14141 EMAGE:14141
euxassay_001825_20 euxassay_001825_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14141Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14141_wholemount_strong.wlz
14141_wholemount_moderate.wlz
14141_wholemount_weak.wlz
14141_wholemount_possible.wlz
14141_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14141_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4931
Entity Detected:Pglyrp2, peptidoglycan recognition protein 2 ( MGI:1928099)
Sequence:sense strand is shown

>T4931
GCGACAGGTTAATTCTCATGCTCCTATCCTCCTAGGGCCTCCGAGGTTCTCTGCTGGGTCTGTGCCCTGG
AACTGGAGACCCACCATGAAGGCCTGGGGTGCCCTCTGGATCGTGCTTGGATTGCTGCTGTGGCCAGAGC
CAGGGGCAGCCTCCTCCTTGCCTCTGCTCATGGACTCCATCATCCAGGCCCTTGCTGAACTTGAGCAAAA
GGTACCAGTGACTGAGGCCAGCATCACTGCCTCTGCATGGATTCTGTCAGCCAAGAACTCCAGCACCCAC
AATTCCCTTCACCAGCGCTTGCTGCTGAAGGCACCAAGCCACAACACTACAGAGCCAGATCCTCACTCTC
TCAGCCCGGAGCTTCAAGCACTGATTTCTGAGGTGGCTCAACACGATGTACAGAATGGGCGGGAATATGG
AGTGGTGCTGGCACCTGATGGCTCCACCGTAGCTGTGAAGCCTCTGCTGTTTGGGCTAGAGGCCGGTCTA
CAGGCACACAGCGTTGCTAACTTGCCTTCAGATTGTCTGGCTATCCCCTGTGATACTGGAGACACCTTGG
CCAATATTAGAGCCACCTGGCCAGGACTCATGGATGCTTTTCCAAATGCCTCTTCTCCAGATGTTGGAGC
CACTTTACCAAACGACAAAGCCAAGACTCCCACCACTGTGGACAGACTCCTGGCAATCACCTTGGCTGGT
GACTTAGGTCTGACCTTCCTCCACAGGTCCCAGACTTGGAGTCCTCCAGGACTGGGAACTGAGGGCTGCT
GGGACCAGCTTACTGCCCCCAGGGTCTTCACACTGTTGGACCCCCAGGCATCCAGGCTCACCATGGCTTT
CCTCAATGGTGCCTTAGATGGAGCTCTCCTTGGGAACCACTTGAGCCAAATCCCTAGGCCCCACCCACCC
CTCAGCCACCTGCTAAGAGAGTACTATGGAGCTGGGGTGAATGGAGATCCGGTGTTCCGAAGTAACTTCC
GAAGGCAGAACGGTGCTGCTTTGACTTCAGCCCCTACCCTGGCCCAGCAGGTATGGGAGGCCCTTGTCCT
GTTACAGAAACTGGAGCCAGAACACCTACAGTTGCAGAACATTAGCCAAGAGCAGCTGGCTCAGGTAGCC
ACCTTGGCTACCAAGGAGTTCACTGAGGCTTTCCTGGGATGCCCAGCCATTCACCCCCGCTGCCGTTGGG
GAGCGGCTCCCTACCGAGGCCACCCAACACCACTCCGGCTGCCACTTGGATTCTTATATGTGCATCACAC
ATACGTGCCAGCGCCACCCTGCACCACCTTCCAGAGCTGCGCCGCCGATATGCGCTCCATGCAGCGTTTC
CACCAGGATGTGCGCAAGTGGGATGACATCGGCTACAGTTTCGTGGTAGGCTCCGACGGCTATCTGTACC
AGGGCCGTGGCTGGCACTGGGTAGGTGCGCACACACGCGGCTACAACTCCCGCGGCTTCGGTGTGGCCTT
CGTGGGCAACTACACTGGGTCACTGCCCAACGAAGCTGCGCTGAACACGGTGCGCGACGCGCTCCCGAGC
TGCGCAATTCGCGCAGGTCTCTTGCGGCCAGACTACAAGCTGCTTGGCCACCGCCAGCTAGTGCTCACCC
ACTGCCCCGGGAACGCGCTCTTCAACTTGCTGCGCACCTGGCCTCACTTCACAGAGGTTGAAAACTAAGA
ACTCCTTTGAGAGACCCTTGAAGATCCAGGAGGTATTATCCCTGATGATCCTTTGAGCAACCACAGACCT
CCAATAAAGGGACCACTGAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5124925 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5124925 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14138 same embryo
 EMAGE:14140 same embryo
 EMAGE:14137 same embryo
 EMAGE:14139 same embryo
 EurExpress:euxassay_001825 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS