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EMAGE:14255

Ceacam20 carcinoembryonic antigen-related cell adhesion molecule 20 ( MGI:1918851)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14255 EMAGE:14255
euxassay_004082_01 euxassay_004082_02

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14255Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14255_wholemount_possible.wlz
14255_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14255_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5566
Entity Detected:Ceacam20, carcinoembryonic antigen-related cell adhesion molecule 20 ( MGI:1918851)
Sequence:sense strand is shown

>T5566
GTGTGTGCCAGCCAGGAGAGGGACTACCTGGCACACTGAGGCCAGGCACCAGAACTCATGGAGCTTGCTG
GCTTCCACGGCTGCTCGTGGACAGTGATCCTTCTCTCAGCCTTACTTCCGACCACATGGAGACCCCCAGC
TGCTGCCCACTTCATCCACCGTGCCGACCTGCTTAGCAACACCCAGATGGAGAGAGCTCCACTGGCCAAG
CTCACCCTCACAGTCAATCAGAGCATTGTCACAGAGCAGAGGGAAATGGCAGTTTTCTACTGTAACACTA
ATGCTGATAACATCACCATCCACTGGGTCTCCAACAACTCTCTGCTTGTGTTGAATGAGCGCATGAAGCT
GTCTGCAGATAACAAGACCCTCACCATCCTCATTGTCCAGCGGGAGGACTCGGGGTCTTACCTGTGTGAA
GTGCAGCATGGCTTTGAGGTTCAGAGAAGTAACACTGCCTCGCTGACGGTGAACTATGGTCCTGATCCTG
TATCAATCAAGCTGGACTCAGGAGTAGCTGCTGGGGATGTGGTGGAGGTGATGGAAGGCAACACCGTGAA
CTTCAGGGTGGAAGCACAGTCCTCCCCTGTCCCTGCCTATGCCTGGTATCTCCCCAGCGACTTCATCCAG
CCCCCTACCACAGGAACATTCACAATCGATGCTGTGTCCAGGGAACATGAGGGCATGTACAGGTGCCTGG
TGTCCAACCCTGTCACCAACTTGTCCCGCCTAGGTGTGGTCAAAGTCCAAGTGCTTGAAAAAGTGACTGC
ACCGAATATCGAGTTCCCAACCTTGGCCCTTGTGGAGAATGCCACCTCTGTGACACTGACCTGCAAAACC
AGCCACCAGAGGGTTGGTGTCCATTGGTTTCTAAAGGGTCAGCCACTCAGGCCTAGTGACCGCCTGACAC
TGTCATCCCAAAACAGAACCCTGACCATCCATGGCCTTCAGAGAGATGATATTGGGCCCTATGAGTGTGA
GGTGTGGAACTGGGGTAGCCAGGCACGCAGCGTCCCCCTGAAGCTCACCATCAACTATGGCCCCGACCAA
GTGGAAATCACCCAGGGGCCAGCGTCTGGAGTGGTCAGCACCATTGAGGCAATGCTCAACTCCAGCTTGA
CCCTGTATTGCCGGGCAGACTCCATACCAGGTGCCAGGTATCAGTGGACCCATGAGCACTCCTCTAAGGT
GCTTGATGGGGAGCAGCTGAGCATCGAAGCACTGAGGCAGGAGCATCAGGGCATTTACAGCTGTACAAGC
TCCAATGATGTCACCGGCCTGGCCCGATCTGCCTCTGTCCTGGTCATGGTGGTAGGTCTCCAGTCATCCT
CTATGTCTCCTGGAGCCATCGCTGGCATCGTTATCGGGATCCTGGTTGCCATTGCTTTGGCGATAGGTCT
GGGCTACTTCCTCTACAGCACAAAGGACAGATGGACTCGCAGGAGATCAGCCAGTGATACAACGAGCTCT
AATACCATACCACCCACCTCTGTGATGCAGAGCACCCTGGAGTCCAGGCACAACAAACCAATGACTGTGT
ATGACAATACCCCAAAGCCCGAAGGAGAGGCCAGAGGCAAAAAGATGTGGTCACTGCCACGTGACTCCCC
AGAGCAGTTCTATGAGAAGAAACCACCTTCTGCAGCTCCTGAGGGCCCCAGGAAGCCATTGCCCCAAATC
CCAAAGCAGCCATTGATGCCCCCAGGACCAGGCAGAAATGAAGAGTCAAATTATGAGAAACTGCTGAATT
CAAACCATAGTCTTTACTGCAAGATCACCCCATCAGCCTGACGCATGCCAAGCTTCTTTTCCCAGTTAGA
CATGCCATCCTGGGCCACATACTCTGTGACCTTGATACCTGCACTTTAGAATCCAGCCATTCCTTGCCAC
CACTGCGGACTTCATGATGACCTAGCTGGATCAGACTCTGGACAAACAGGTTCCACCAAATCTTAGCTTC
TGGCTCACGCTTCATTTATAGCAACAGAGCTATAAATAGCTGGATTTTGGGGAGATGGCTCAGTCATTAA
GATCACTTGCAGCTCTTCCAAATACCACAGGTTCAGTTCCCAGAACCCTTGTATGGAGACTTACCTATTC
TAACTCCAGCTTCTAGGGATCCAATACCCTCCTCTGGCCTCTGCAGAGACATGAAGACATACAGATTAAA
AAAAAAAAAAAAGCAAATCTCACTCTCTTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT
TCTCTTCTTTTCTTTTCTTTTCTTTCAGACAATGTTTCACTATGCAGCCCTAGCTGGCCTGGAACTTGCT
ATGTACATCAGGATGGCCCTGAACTCATAGAGATCCCACTGCCTTTGCTGGGGTTAAAGGCATATGCCAT
CATACCCAGCTCAGTGTGATGAGAAGCTCAGTGGTTAAGTGCTTTGCCTGACAGGCATTGAATCTGGGTC
CAGTCCCTAGCAGCACACATACAAAATGCAACAAAGGGTCTGGAGAGGTTTCTAGTGCTTAAGATGCACA
TGTCTCTTCAAGAGGACCCAAGGTCATCTCCCAGGGCTTAGGTCAGTGCCTCACAACTTCCTGTTAGCTC
CAGCTCCTGAGCCTCATGTGCTTATGTGCACACACATAATAAATAGTGCCTGGGTACACATAAAAAAATC
TTCCTTTTTTAAAAAAAGCAATGGCAGGCTGCATAGTGGAAAGATGGCTCAGCAGTTAAGAGCTCTGGCT
GTCTTCCGGAGGACCTAAGTTCAATTCCCAGCACCCACATGGAAACTTACAACTATCTGTAACTCCAGCT
CCAGTGGCACCCCTCACACCAGCATACAGGCATATAAAAATAAAGATAAACTATTTAAAAGAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6476373 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6476373 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14254 same embryo
 EurExpress:euxassay_004082 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS