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EMAGE:17098

Fbxo18 F-box protein 18 ( MGI:1354699)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17098
euxassay_001478_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17098Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17098_wholemount_strong.wlz
17098_wholemount_moderate.wlz
17098_wholemount_weak.wlz
17098_wholemount_possible.wlz
17098_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17098_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4474
Entity Detected:Fbxo18, F-box protein 18 ( MGI:1354699)
Sequence:sense strand is shown

>T4474
GGCCGAAGGAGGGGCTTGCTGGTCGGGGAAAGGCTGAATGTCCGGCGGCATCGCCTGGGTGGTGTCGCCG
CCGGGGTCCTGGGCCGGGCCGCCATATGAGACGGTTTAAGCGGAAGCATCTTACAGTGGTCGACTGCCAT
CATTTGGCCCGGAGTCATTTGGCTGTGACTCAGCCCTTCAGTCAGAGATGGACAAACAGAGACCCTAACC
ATGGTCTCTATCCTAGACCCAGAACAAAAGGACGGAATAGGGGTCGAGGATGTCAGAGATATATTTCTGA
GTTCTTCCTAGCTGGCCACCAGCACTGTACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGC
TGTCAGGACGCTGAGGGTGACATGATTTTAACTGCAGAGAGCAGTTGTACTCTGCCTCAGGTGGATAATG
GAGAAGCGAGGCTGGGCTCATCAGGATCTGCACAGCCTGCCAGGAAGCGGGCTCACTGCTTTGAGGAAGC
CACAGAGAGCGGCCAGTGGGATGGCGTTACTAAGAAGACACCGCGCCATCGTTTGTTCCCATCGTGTTCA
AGGCTTAGGGAGGCCAGGCAAGGGGCAGAGGACAGTTTGTCCCAGTGCTCCCCAGTGCCGGGGGAAGCTG
GCCGAGACATTGAGGACATTGGTCCTGATCCCTTGCCTGACTCATACTATGGGCTTCTTGGAATGTTGCC
TTGTCAGGAAGTGCCCAGCCACATTTGCAGGCTGCCAAGTGAAGTGCTGAGACACATCTTTGCTTTCCTG
CCAGTGGAGGACCTCTACTGGAATCTCAGCCTGGTGTGCCACCTGTGGAGGGAAATAATCAATGACCCGC
TGTTCATTCCTTGGAAGAAGCTATATCATCGATACTTGATCAATGAAGAGCAGGCTGTCAGCAAAGTGGA
TGGCATTCTCTCGAGCCATGGCATAGAAAAGGATTCGGACCTATGTGTGCTGAACCTCATACGATACACG
GCCACCACCAAATGCTCCCCAAGTGTTGACCCTGAGAGGGTGCTGTGGAGCCTGAGGGATCATCCTCTAC
TTTTGGAGGCTGAGGCGTGCATGCGGCAACAACTACCTGACCTCTATGCAGCTGCTGGGGGCATTAACGT
CTGGGCCTTGGTGGCAGCCATGGTGCTCCTCTCCAGCTGTGTGAACGACATCCAGCATCTGCTCTTCTGC
CTCAGGAGACCCAGCTCCACAGTGACCATGCCAGATGTCACCGAGACCTTATACTGCATAGCTGTGCTCC
TTTATGCCATGAGGGAGAAGGGGATTAACATCAGCAATAGGATTCACTACAACATTTTCTATTGCCTATA
TCTTCAGGAGAATTCCTGTACTCAGGCCACCAAAGTTACAGAGGAGCCATCTGTCTGGCCAGGCAAGAAA
ACATCTATCCAGCTAACACATGAACAACAGCTGATTCTGAACCATAAGATGGAGCCTCTCCAGGTGGTAA
AAATTATGGCATTTGCAGGCACCGGGAAGACTTCTACCCTGGTCAAGTATGCTGAGAAGTGGTCTCAGAG
CAGGTTTCTGTATGTCACGTTCAACAAGAGCATCGCAAAGCAGGCAGAGCTTGTCTTCCCCAGCAACGTC
ATCTGCAAGACCTTCCATTCCATGGCCTACAGTCACGTCGGGCGGAAGTACCAGCTGAAGAAGAAGTTGA
ATCTCTTCAAGTTGACACCCTTTATGGTTAACTCCGTCCTTGCTGAAGGAAAAGGTGGATTTATAAGGGC
CAAGTTAGTGTGTAAGACTTTAGAAAACTTCTTTGCATCAGCTGATGAAGAGCTAACTATCGATCATGTG
CCCATTTGGTGCAAGAATAGCCACGGGCAGAGAGTCATGGTGGAGCAGAGTGAGAAACTGAATGGTGTCC
TTGAAGCAAGCCGACTCTGGGACAACATGCGGAAGCTGGGGGAATGCAAAGAAGAGGCATACCAAATGAC
ACATGATGGCTATTTGAAACTCTGGCAGCTGAGCAAACCTTTGCTTGCCTCTTTTGACGCCATCTTTGTG
GATGAGGCCCAGGACTGTACCCCAGCTATCATGAACATAGTTCTGTCTCAGCCATGTGGGAAGATCTTTG
TAGGGGACCCCCACCAGCAGATCTATACCTTCCGAGGTGCAGTGAATGCTCTGTTCACAGTTCCCCACAC
CCACGTCTTCTATCTCACACAGAGTTTTAGATTTGGTGTGGAAATAGCCTATGTGGGAGCTACCATTTTG
GATGTCTGCAAGAGAGTCAGGAAGAAGACGTTGGTTGGAGGGAACCATCAGAGTGGCATAAGAGGTGACA
TAAAGGGACAAGTAGCTCTGCTGTCCAGGACCAATGCCAATGTGTTTGACGAGGCTGTCCGGGTAACAGA
AGGAGAATCCCCTGCAAGGATACATTTGATTGGGGGGATTAAATCGTTTGGATTGGACAGAATCATTGAC
ATTTGGACCCTTCTTCAGCCAGAGGAAGAACGGAGGAAACGAGACCTCATCATTAAAGACAGGTTCATCA
GAAGATGGGTGCATAAAGAAGGCTTCAGTGGCTTCAAGAGGTATGTGACTGCTGCCGAGGACAAGGAACT
GGAAGCGAAGATTGCGGTAGTTGAAAAATACAATATCAGGATTCCAGAACTGGTAGAAAGGATAGAGAGA
TGCCACATAGACGATTTGGACTTTGCAGAGTACATTTTGGGCACCGTGCACAAAGCCAAAGGGTTAGAGT
TTGACACTGTGCACGTTTTGGATGATTTCGTGAAAGTGCCTTGTGCCAGGCATAATCTTGCCCAGCTTCC
TCACTTCAGAGTTGAGTCGTTTTCTGAGGATGAATGGAATTTACTGTATGTTGCTGTTACTCGTGCCAAG
AAGCGGCTCATAATGACCAAATCCCTGGAGAACATCCTGACTCTGGCTGGGGAGTATTTCTTGCAAGCAG
AGTTGACAAGTAACGTTTTGAAAACAGGAGTGGTCCACTGCTGTGTGGGGCAGTGCAACAACACCATCCC
TGTGGACACCATCCTTACCATGAAGAAACTGCCTATCACTTATAGCAACAGGAAGGAAAACAAGGGTGGC
TACCTCTGCCACTCATGTGCAGAGCAGCGCATCGGGCCTTTGGCATTCCTGACTGCCTCCCCAGAGCAGG
TGCGTGCCATGGAACGCACTGTGGAAGACATAGTGCTGCCCAGGCAGGAGGCCCTGCTCTTCCTTGTCTT
CTGAGGCTGTGACTCCACGTGCTAAAGGAGCCATTCTGGGCTGCATTTCTGCTCACAGGAGACTCTGAGT
TCAATCACAGCATCTCTGAGGAGGAAGATAGCAACCAGAGTTGGACCTGCCATTTCCCCGTTCCTTACAG
AGAGCCAGTTCCCACTTGCCTGTCCTCCAAATGCCTCAGGCCAGGGAACTGGAAGAAGTTCTTTTGATAA
AAAAATCATTTTATGTATTTAAACTTTTATTACAAGGTTTCAATTAAACAGGTATTGAGCAGTGGCGTGC
CACTGTGAAGTCTAAAAAAACAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4948804 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4948804 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17099 same embryo
 EurExpress:euxassay_001478 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS