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EMAGE:29235

Smcr7 ( MGI:2144199)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235
euxassay_005131_01 euxassay_005131_02 euxassay_005131_03 euxassay_005131_04 euxassay_005131_05
EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235
euxassay_005131_06 euxassay_005131_07 euxassay_005131_08 euxassay_005131_09 euxassay_005131_10
EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235
euxassay_005131_11 euxassay_005131_12 euxassay_005131_13 euxassay_005131_14 euxassay_005131_15
EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235 EMAGE:29235
euxassay_005131_16 euxassay_005131_17 euxassay_005131_18 euxassay_005131_19 euxassay_005131_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8531
Entity Detected:Smcr7, ( MGI:2144199)
Sequence:sense strand is shown

>T8531
GGGCCTCCAGGGTCCTACTCGCCCTGTCCTTGGGTCCATGCGCTGACGCTCGGACGCAGGTGACCATGGC
AGAGTTCTCCCAGAAGCAGAGGAAACAGAGCGGCAGCGAGGGCCTGGGCAGTGTGGTGGACTTCCTCTTG
GCTAATGCTCGATTGGTGCTAGGTGTGGGCGGGGCTGCAGTGCTGGGCATTGCTACCCTGGCTGTAAAGC
GGCTCATCGACAGGGCCACCAGCCCTCCAGATGAGGATGACACCAAGGGGGACAGCTGGAAGGAACTGAG
CCTGCTGAGAGCCACATCGCCCCAAAAGCCCCAACCCCCTCCTGCTGCCTTCAGCCAGCCCCTAGCTACT
GGGTCCCCCTCCCCCTCTGTGCCAGTGGAGCCCACGCCCATTCATTCTCCCACGACACCTAAGTTCAGCA
CTATAGCACCCCTGTGCCTGACGTTCCAGGAGAGGCTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCC
AGAAGCCCACGTGACGTTGGCGAAACAGCTGGCTGGAGACATTGCCTTGGAGCTGCAGGCCTACTTGAGG
AGCAAGTTCCCAGAACTGCCCTTTGGTGCACTCGTGCCGGGTGGGCCTCTCTACGACGGGCTCCAGGCAG
GGACTGCTGAGCACGTGCGCCTGCTGGCGCCTCTGGAGTTGGAGCCGGGGCTATGGAGCCTGGTACCTGG
CGTGGACACTGTGGCCAGGGAGCCTCGATGCTGGGCTGTACGCAGGACTCAGCTTGAGTTTCATCCCCGT
GGGTGCAGCCCATGGGACCGCTTCCTGGTGGGGGGCTACCTCTCCTCCCGAGTCTTGCTGGAGCTGCTAC
GGAAGGCCCTGTCAGCCTCTGTCAACTGGCCAGCCATTGGCAGCCTGCTCGGGTGTCTGATCTGGCCCGA
TGTGGCTTCGGAGGAGCTGCTGCTCAAAGTGCAACACGAGTGCCTGGAGTTCACTTTAGCTGTGCTCATG
GTAGTCCCTGGGGCCAGCACTGATGACCGCCTGCTGCTGGCTTGGCCCCTAGAGGGGCTGGCCAGCAATC
TCTGGCTGCAGGATCTATATCCAGTAGAGACCGCCCGTTTGCGGGCCCTGGATGACCAGGATGCTGGTAC
TCGGCGGAGGTTGTTGCTGCTGCTGTGTGGTATCTGTCGTGGCCATCCGGCTCTAGTGCGGCTGGGCTGG
AGCCACCTGACTCAGGTGGTTCTGCATCTGGGTGAAGAGGAAGTGGCCTGGACTGAGGAGGCCTTGGGGG
AACGGTTTCTGCAAGCCCTGGAGTTTCTGGTGGGCAGCTTGGAGCAGGCTAGCCTGCCCTGTCACTTCAA
CCCCAGTGTGAACCTCTTGGGTAACTTCCGGGAAGAGGAGATTGATGACATTGGCTACGTGCTGTACAGC
GGCCTCCAGGTTCCTGAAAGCCTATTCTAGGTAAATGAGGACTGTAACTGACATGTTTTCTGATGCTGGA
GAGCAGCAGCCACCTCCCTCCTAGGACACTGCAGTGTGGTTTGCTTTATTTTAGCCAGAGTGGAGGGGGA
GTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGGTGATCAAGAGTCTCAAACCCAGAGA
CTCTGGGTTGCTGACATCTGAGTGTGGCTGGCCTCCCCTGGCTGACCGCTTTCAGTGCCAGCCACATTAA
TGGCCCTTAGCCGTCTGGGGTTCATTTAGGGACTTGGGCTCAGGCCACCATCACCAGCAATGAACTCACA
AAGAATAAGATGTGGCTTTTGATTTCCTAGGCTTCACCTAGGCCAAGACTGTTTTTTTTGTTTTTTTGTT
TTTTTTTTTTTTTCAAAAAAAAGAAAATGTTCTTGGGTGGGTAACAGCCCCAGGTCTCCTGGAGGCACTC
CGAGGGGGTCAGCTGGAGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTCCTGATGGTGGTGCATTTG
TTTTTCTGATTGGGTCCTCAGGCCTTGAAGCTGAAGTTGACTCCCTCGAGGGCTCCCTGCCTTATACCCC
AGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTCTCTATGGGCCACGAATTACCTCTGGGAGAACAA
CTTCCTCACTGGGGGGCTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT
CACTGCAGGGTAGAGGATACGCTCCTCTCAGAGGCCTGTGTGCAGACCTGTCCTCTGCAGCGTGCCAAAA
TATTCATGATAGATGTGTGTCCTCACCTTGCACCCTGGTCCAGGTGGCATGGCTGGAGGAGGGAGACTGT
CTCCCCTACAAGGGGGGCTTTCTATTTTAGGTACCACCCCCTTAAACACACTGAAACAAAGCCATGCCTT
GAAGATGTGAATAAAAGGAGAAAGAACTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
Notes:The probe template was PCR amplified from IMAGE:5708020 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5708020 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_005131 same experiment
 EMAGE:29272 same embryo
 EMAGE:29271 same embryo
 EMAGE:31120 same embryo
 EMAGE:29237 same embryo
 EMAGE:31336 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS