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EMAGE:29345

Tbc1d20 ( MGI:1914481)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29345
euxassay_003804_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7003
Entity Detected:Tbc1d20, ( MGI:1914481)
Sequence:sense strand is shown

>T7003
GGTGGGAGCCGCTCCTCAGGCTCCGCCGCCAGCCGGGGCTCGGGCTGGGGCCCGGGCCCCCGGAGATGGC
CCTCCGGCCCTCAAAGGGCGACGGCTCCGCCGGCCGCTGGGACCGCGGCGCAGGGAAGGCAGACTTTAAT
GCCAAAAGGAAAAAGAAGGTGGCAGAGATACACCAGGCTCTGAACAGTGATCCCATCGACTTGGCTGCCC
TCCGACGAATGGCTATCAGTGAGGGAGGGCTCCTGACTGATGAGATCAGGTGCCAAGTATGGCCTAAGCT
CCTCAACGTGAACACCAGTGAGCCACCGCCTGTGTCAAGGAAGGACCTTCGAGACATGAGCAAGGACTAC
CAGCAAGTGCTGCTGGACGTCAGGCGATCTCTTCGGCGCTTCCCCCCTGGCATGCCGGACGAGCAGAGAG
AAGGGCTCCAGGAAGAGCTAATCGATATCATCCTCCTCGTCCTGGATCGCAACCCTCAGCTCCACTACTA
CCAGGGCTACCATGACATCGTGGTCACGTTTCTGCTGGTGGTGGGGGAGAGGCTGGCAACATCCCTGGTA
GAAAAATTGTCTACCCACCACCTCAGGGATTTCATGGATCCCACAATGGACAACACCAAGCACATCCTAA
ATTATCTGATGCCCATCATTGACCAAGTGAGCCCAGAGCTCCACGACTTCATGCAGAGTGCTGAGGTGGG
GACCATCTTTGCCCTCAGCTGGCTTATCACCTGGTTTGGGCACGTCCTGATGGACTTCAGGCACGTTGTG
AGGTTATACGACTTCTTCCTGGCCTGCCACCCACTTATGCCCATTTACTTTGCAGCTGTGATCGTGCTGT
ACCGGGAGCAGGAAGTCCTGGACTGTGACTGTGACATGGCCTCTGTCCACCACCTGTTGTCCCAGATCCC
TCAGGACCTGCCCTATGAGACGCTCATCAGCAGAGCAGGAGACCCCTTTGTTCAGTTTCCCCCTTCTGAA
CTTGCAAGGGAGGCAGCTGCTCAGCAGGAGGCTGAGAGAACGGCAGCTTCTACTTTCAAAGACTTTGAGC
TGGCATCAACTCAGCAGAGGCCAGATATGGTGCTGCGGCAGCGGTTTCGGGGACTTCTGAGGCCTGAGGC
TCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACA
GTGGCCCTCGGAGCAGCAGCACTAGCAGTGGTGAAGAGCGCCCTGGAGTGGGCCCCTAAGTTCCAGCTGC
AGCTGTTCCCCTAAACTCAGCTCAAGCAGCTACTCCCTCACCCAGGGCACCAAGCTCTCCCCATTTCCAG
AAGGAGGGTAAAGTTGCTGTGATTAAAGGGTTTCTGTCAGGGGTGTTCTGTCTGCCACCCTTGGCAGCTT
GTCTTTTGGCTTTGATGGCTGGTGGCAGAGCTGCCTGACACTGGCTTGCCGGACCCGAGTGCTCTCTGCA
CCTCTCCTGTTGAAAAGTGGCTCTGGAGCACCTGGTTACCCAAGTCACTGCCTAAAAAGTTGGGCCCAGA
GATGCCCTCCTTATAGCACCATGTGTCTTGAGTATCTTTAGACAAAGCAGGCAGGATGGTCCAGCCTTGG
GATGAAAGTGAGGGGAGAAAACTCTAGCCTGGGAGCCAGCTGGACCCTCTTAAAAGCGGCCATATTAGCT
GGTCAGAATCAGAGATAGACTCAAGCTGGGTTCTAATTAAATTTTTATGATCCCAGCCTAGAGCTCATGT
GCAGAGGAATGTTAATCACCAGGATGGTGTTGCCTGTGTCTCCCTGTTCTTTCTCCTCAACAAGCCACAT
GACAAAACCTACAAAGACATTTTTAATACTGTTTTTATGATTGTATACTACACCTAACATAGCAAGTACT
CTTCACTTTAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3991310 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3991310 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003804 same experiment
 EMAGE:30877 same embryo
 EMAGE:29422 same embryo
 EMAGE:30644 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS