Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:29412

Prkra ( MGI:1344375)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412
euxassay_003773_01 euxassay_003773_02 euxassay_003773_03 euxassay_003773_04 euxassay_003773_05
EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412
euxassay_003773_06 euxassay_003773_07 euxassay_003773_08 euxassay_003773_09 euxassay_003773_10
EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412
euxassay_003773_11 euxassay_003773_12 euxassay_003773_13 euxassay_003773_14 euxassay_003773_15
EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412 EMAGE:29412
euxassay_003773_16 euxassay_003773_17 euxassay_003773_18 euxassay_003773_19 euxassay_003773_20
EMAGE:29412 EMAGE:29412
euxassay_003773_21 euxassay_003773_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6957
Entity Detected:Prkra, ( MGI:1344375)
Sequence:sense strand is shown

>T6957
CCTTAGCTGGAGGGAGGCAGGCAGCGATTCGAGGGGCGTCCAAGCGGCAGCGCGGGCACGCTCCTCTCGG
GAACTGGCCGACGTGGAGAGGGAGGACCCAGATCCACACTTCTCTTGATTGCTGTGGCCAGCCGTCCCTT
CTCGCCATGTCCCATAGCAGGCATCGTGCCGAGGCCCCGCCGCTGCAGCGCGAGGACAGCGGGACCTTCA
GTTTGGGCAAGATGATAACAGCTAAGCCTGGGAAAACACCGATTCAGGTATTGCACGAGTACGGCATGAA
GACCAAGAACATTCCAGTTTATGAATGTGAAAGATCCGATGTGCAAGTACACGTGCCCACTTTCACCTTC
AGAGTAACCGTTGGTGACATAACTTGCACAGGTGAAGGTACAAGTAAGAAGCTGGCGAAGCACAGAGCTG
CGGAGGCCGCCATAAACATTTTGAAAGCCAATGCAAGTATTTGCTTTGCAGTTCCTGACCCCTTAATGCC
TGATCCATCCAAACAGCCGAAGAACCAGCTGAATCCAATTGGCTCATTACAGGAATTAGCAATTCACCAT
GGCTGGCGACTTCCTGAATATACCCTTTCCCAGGAAGGAGGACCGGCTCATAAGAGGGAATACACCACGA
TCTGCAGGCTTGAATCATTCATGGAAACTGGAAAGGGGGCATCAAAAAAACAAGCCAAGAGAAATGCTGC
TGAGAAATTTCTCGCCAAGTTTAGTAATATTTCTCCAGAGAACCACATTTCTCTAACGAACGTGGTTGGA
CATTCCCTAGGATGCACTTGGCACTCCTTGAGGAATTCCCCTGGTGAGAAGATCAACCTCCTGAAAAGGA
GCCTCCTCAGTCTCCCGAACACAGACTACATCCAGCTGCTTAGTGAGATTGCCAGCGAGCAAGGCTTTAA
CATAACGTATTTGGATATAGAGGAGCTGAGTGCCAACGGACAGTATCAGTGTCTCGCAGAGCTGTCCACC
AGTCCTATCACCGTGTGTCACGGCTCAGGCATCTCCTGTGGCAATGCACAGAGTGACGCTGCTCACAATG
CTCTGCAGTATTTAAAGATAATAGCAGAAAGAAAGTAGGCTTGGAGCGACTTAGGAAATCTTTCTGCGGC
GCAAAGAAGTTTCCCTCGCCCTTCTTTCCAAGCAAAATGTTTACTGTAATGTATGTCTGTGTGTCCTTTC
CAAATCTCTTCAGATTCCGTCAACTTTCCAGATTTAAATGTCTCCTGGTAGGTTATTAAGCTCTTTTTAA
TGGCTTCAACTTTGTATTGGTATATCGTGTTTATAAACTTTGTACCACAAGGCTGAGTGTGGTTTTCATT
TTACAGGGTCAGACGCATAGGTTGAACATGCATGTTTGACTGTAACGGTAAAGAGATAAAACAGCCTTAC
TGGTGCTGAAACTCTTTTGTGCAAAGCTTTGTGGAGTGGATTCTGAAGAGCCCCTTTAGACTAGAGTGTT
GAGGCTTGTGATGAATGTCATTGCTAAATTTCAGGGAACGTGGTTGGTTTGCTATGTATTTGAAACCATG
GAATAAAGAGCTGTTCTTATAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3985758 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3985758 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003773 same experiment
 EMAGE:31242 same embryo
 EMAGE:31222 same embryo
 EMAGE:31089 same embryo
 EMAGE:31188 same embryo
 EMAGE:29413 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS