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EMAGE:30230

BC031901 ( MGI:2387634)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30230
euxassay_002683_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5299
Entity Detected:BC031901, ( MGI:2387634)
Sequence:sense strand is shown

>T5299
GACCAGTTAGAAACTACCTAAGGACCCTCAGGCATTATGAGAGACTTCTACGTCAGAGTTACTATCCTAG
TTACAGGTCTTTGCTTTGTGGAAACAGTGACAACCCCATCAAGAAAAAGCAGCGTTTCCTTCAATCCCGA
GTACCAGAGGAATGGGGACCTTCTGGTAAACTGGTCTTCTATAAGACACGTGTCACAGAACACAGACGCC
ATGGATAGAAGTTTCTACTTCTTTAGAGTTCTCTTCCAGCCTCACACACAAAAAGAACGGCACATAAAAC
CTCCGGACCGCACTCACCATCGCATATCGAAAGTGACCCTCGACCCTCTGGCGCATTTACATGCTTTGGA
GATACTAAACCTCAGCAACAAAGCTATCCACTACTTCTCGCTGGATCAGCCCCTGCCTCCTTCCTCACAC
CAAAAGCGCCACGGAGGCCACTCCCACAGCCGGCTCCCCAGGCTCCAGGTGCTGATCCTTCAAAGGAATC
AACTCAGTGGTACTCCTAAAGGACTGTGGAAGCTGAAGTCATTGCGGAGTCTGGATCTGTCATTCAACAG
GATAGTTCACATTGGGCTGTCTGATTTTCATGGCTGCCTGCAGCTGGAAAGCATCTATTTAAAGAGCAAC
AAGATCTGCACGATTCACCCCAAAGCCTTCAAAGGGCTCAAAAAATTACAGGTGGTAGACCTCAGAAGCA
ATGCACTGACCACTCTGGTACCGATTGTGACCATTGCTCTAGAATTGCCCCACCTGGAACTTGGCTTGGC
TGATAACCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAGGGAA
ATATGGAAAGCCATCTGCAACATGTCTGTGGAGAACAAGAGGCCAAATGCAGAGACTCACCAGATCAGAA
AATCCAGGGATACACACCTTCTTCTGTCTCCTCCAAGTGACTTGAAAAGCCTCATCCAGAGCAAGGCAGA
GAGGCCCCAGGCAGGGATGGACATGCACCTTTCTGCTCTGGGGAAGGAGGCGAAGGATGGCTATGGTGAT
CTCAGAGGGATGTGGCCACAGTCCCCAGTAGAACTCAGAGATTCTCAGGATGAACAGGTCACTGACAGAA
AGGATGACAAGCCCCCAGCCCTTGAGCTGGCCATCTGCCTGTCGGTGTTCATCACGTTTGTGGTGGCTTT
CTGCCTGGGGGCTTTTGCAAGGCCCTACATTGACAGGCTACGGCAACAGAGATGCTCGAATAAAAGGCCC
GGCTCAGATAATGCCTACTCAAACAAGGGCTTCCATGGCGACATTGAAGGTGCTCAACACATGGAGTACC
AAGGGACAGATCTACACCAAACTACCCACCACCTACATCTTTCTGAGAACCAGAACCCTTCGTGGGTGGC
AGAGCCAATCCCACACAGTGCTGTCCAATCAGAACAGATGCTGGGAAGCAACGGAACAGACCCCGGTCAT
CAGCAGAGCCCAGAGCAACTCAAGGACAGCAATGAATCAAGAAGTGGAGATAGCATCGTGCTTCCAAGTG
GCCCTGTAGCCCATCTTGCGCTCCATGGCCTTCCAAACGCTGATGCACACAAGGCGATTTCACCAGTGCA
GCATCACCATGATTTTCTTGAAGAAGCACATTATGACACAGTGGCCCAGGAATATTCTCTCATTGACGAT
GTGATGGACAGGTCTTCCATCACTGGCCCTCTGGGAACTTTCCCCAGCTCTGTCGAGAGTAGGCGGGATG
ACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTTCTTTCTCCAAAACTCTAGCACATGCAAACACTAG
AGAGGCTGAGGGGAGTATGGAAACGGGGTGCCCTGAACCTTTGGGAGCCATGGACTCACAGATGGGATCT
TCTGAGGAAAGGCAAGTGAGCAATTCCATTAGGGAACTGGCCACACAGCAGCCAAGCTTCCAGGGGGTTG
ATGCTGAGGAGAGACTTTCCCATGTCTACAGCGAGGTCCTACACAATGACCCACCCTCTCTTAGGCCAAG
ATGGGGCAGTGGCCATTATGTCATCCCTGCTACTGGGGAGCCTGTGGAGAGAGATGCTCCTTTTGACCCT
CATTATGACTTGGTGACCAACTACGAGTCTGATTCCGACGAGGGTTCTTTGTTTACCCTTAGTTCTGAGG
GTTCTGAAGACACAAGGAGCTTGGCTGAGGAACAGGCATCTGTGGAGAATGATGGGACCAGCCAGCCCCT
CCCAAGCAGGAACTTGGGGGAATACAAGGACAGTGTGACATCAGCAGAAAGTGTTGAGGACCTCACATCG
CAAAGGATTCCAGAGAAATGTGAAGCGCAGGAAGCTCACCTTAGAAACACTCTTATTTCTGGTCCAGACT
CTTGTGTGTGTGAGACAAATCAGGAAAATGACTCTAGCTCCCTTGACCCTGAGAATAGATCAACGTGGCC
CCAACTCCCAGGACATAAGTTATCACATCATGAGACTCTGGGCACATATGGTGACATAGAACCCCAGTCT
GAGGCAGTAGACTGGCACTACTCCCTTAGAGACCTGGAATCCCCAAATGTAGATAGTTCACCATCACCAC
CATATTCTGATGAAGATCTCTCAGGTCCTGAGGATCGTGCCCGCAAGAGAAGTAAGCATTGGTAAATGGC
AACCTTCCAAGGCTGGGGACAGAGCTCTGTTGGTAGAGCATTTGCTCACCATGCACAAACCCCTGGGTTC
AAACCTCAGCACTGTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA
GGAAACAGGCATGAGACTGAAACAGCTTTTGTGGGGTAGATGATGGAATGCTCTGACAAATGTGGGCTCT
ATTGCTCCAAGCATCAGCTCGTGAGAGATGTCAGTTCTACCATGACAAGACCCAGTCTCCCACCCAGATT
CCAGGATCACACCCTCAACCACAGTTGCTCGAATCTGCACCATCCTGGGACCTAAAAGTCATAATTTCTC
TTCACAAATATGAGCTCCAAAATTCACTTTTTTTAGTCAACACTGTCACAGTGTCAACCCAGTAAACCCG
TTTATAGATTGTAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5362830 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5362830 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002683 same experiment
 EMAGE:30209 same embryo
 EMAGE:30252 same embryo
 EMAGE:31201 same embryo
 EMAGE:30248 same embryo
 EMAGE:30247 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS