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EMAGE:30232

Scn1b ( MGI:98247)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30232 EMAGE:30232 EMAGE:30232 EMAGE:30232 EMAGE:30232
euxassay_002216_01 euxassay_002216_02 euxassay_002216_03 euxassay_002216_04 euxassay_002216_05
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euxassay_002216_06 euxassay_002216_07 euxassay_002216_08 euxassay_002216_09 euxassay_002216_10
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euxassay_002216_11 euxassay_002216_12 euxassay_002216_13 euxassay_002216_14 euxassay_002216_15
EMAGE:30232 EMAGE:30232 EMAGE:30232 EMAGE:30232 EMAGE:30232
euxassay_002216_16 euxassay_002216_17 euxassay_002216_18 euxassay_002216_19 euxassay_002216_20
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euxassay_002216_21 euxassay_002216_22 euxassay_002216_23 euxassay_002216_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6041
Entity Detected:Scn1b, ( MGI:98247)
Sequence:sense strand is shown

>T6041
CCAGGCAGGGGTCGCCGCAGCCTGGATGCGCCCTGTGGCGCGCGCGCACGCAGCATCCCGAGCCTCCCGC
CGCGCGGCGGGGATGCCTGCTCTCCGAGCCCCGGGGCTGGGCCCCCGGCGGTAACCGGAGCGGGGGGGCG
CGCCCCCCCAGCAGCAGCTGCCGCGCCCGCGCCCGGGCCAGTCGCCGCCGGGGCCCATCGCCTGTCGCCG
CGCTCTGCGCACCCACCGCCTTGCGCGGCCATGGGGACGCTGCTGGCTCTCGTGGTGGGCGCGGCGCTGG
TATCCTCAGCCTGGGGGGGCTGCGTGGAGGTGGATTCCGATACCGAGGCTGTGTATGGGATGACCTTCAA
AATCCTGTGCATCTCCTGTAAGCGTCGTAGTGAGACCACCGCCGAAACCTTCACGGAGTGGACCTTCCGC
CAGAAGGGGACAGAGGAATTTGTCAAGATCCTACGCTATGAGAATGAGGTGCTGCAGCTGGAGGAAGATG
AGCGCTTTGAGGGCCGAGTGGTGTGGAACGGTAGTCGGGGCACCAAGGACCTGCAGGACCTGTCCATCTT
CATCACCAACGTCACCTACAACCACTCTGGCGACTACGAATGTCACGTCTACCGTCTCCTCTTCTTTGAT
AATTATGAGCACAACACCAGCGTCGTCAAGAAGATCCACCTGGAGGTGGTGGACAAGGCCAACAGAGATA
TGGCATCCATCGTGTCAGAGATCATGATGTACGTGCTCATTGTGGTGTTGACCATATGGCTTGTGGCAGA
GATGGTGTACTGCTACAAGAAGATTGCTGCTGCTACGGAGGCTGCTGCACAAGAGAACGCCTCAGAATAC
CTGGCCATTACATCCGAGAGCAAAGAAAACTGTACAGGCGTCCAGGTGGCTGAATAGCGCTGGCTCTGGG
CTCCGCCTCATGGAAGAGCCAGCCCCTACGGGTACCCTCCCGCCCTGCAGTGGGGATCAGCCCCTGGTGG
GTACCCTCCCCCGGCAGTGGGGATCAGCCCTTCGGTCTCCCCAGCCTCACAGTTCTGCAGTGGAGCCACG
AGGGTGGGAGCGGGCAGGGACTGATCCCACCTCACCCACCGCCTCCCACCTACCCTCCCACCGCCATGCA
TGATGGGTGAAGCAATATGGCCGCCCCACCCTGCTTTTGCTGCCTGTTTGGGGGAGGGGGCGGTGAGGCG
AGGGGGCAGGCCCCGCCCCTTCTTTTTGCTGATTTGCACATAGGCCACTTCCCACACGCACTGCCAGGCC
AGCCGGCCCCACCCCTGCTTGATGGGGTCAAGAGGGGTCGGGACAGGGACAGTAGTGGGCAGGAGGTTCT
GGGCCTCATCTCCCCTCCGCTTCCTCCGGCTGGACCTGGGGTTCCCTTCCTGTGACACCTCCTAGCCCTG
GCCCACCCGCCCTCTCTCACCAGCCTTCAATTGTGGTCTCTTGGGAAGGGCCTCTTCGGCCTCCTCTCTT
TACAGAAGTAGTTTTTGTTCATGAAATAAAGATTCTTGGACTCGAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3489368 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3489368 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002216 same experiment
 EMAGE:29946 same embryo
 EMAGE:31658 same embryo
 EMAGE:30250 same embryo
 EMAGE:31655 same embryo
 EMAGE:30213 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS