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EMAGE:30467

Ldhd lactate dehydrogenase D ( MGI:106428)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30467
euxassay_005049_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7449
Entity Detected:Ldhd, lactate dehydrogenase D ( MGI:106428)
Sequence:sense strand is shown

>T7449
TGCGGTCTGGCTATGGCCATGCTCCTTCGGGTGGCCACCCAGAGGCTGTCTCCCTGGAGGAGTTTCTGCT
CCAGGGGGTCGCAGGGTGGACTCAGCCAGGACTTTGTGGAGGCTCTGAAGGCAGTTGTAGGGAGCCCCCA
CGTGTCCACTGCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAATCGATGCACAGGTGTCAACCTCCT
GATGCTGTGGTTTGGCCTCAGAATGTGGACCAGGTCAGCCGAGTGGCAAGCCTGTGCTACAATCAAGGTG
TTCCCATCATCCCATTTGGCACAGGCACCGGTGTTGAGGGGGGAGTCTGTGCTGTGCAGGGTGGAGTGTG
CATCAACCTGACCCATATGGACCAGATCACGGAGCTGAATACAGAAGACTTCTCCGTGGTGGTGGAGCCT
GGAGTCACCCGTAAAGCTCTCAATACCCACCTGCGTGACAGTGGCCTTTGGTTTCCTGTTGACCCAGGCG
CAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAACCAT
GCGGGACAACGTGATTAACCTGGAGGTAGTGCTGCCTGACGGCAGGCTGCTTCACACCGCAGGCCGGGGC
CGCCATTACAGGAAGAGTGCAGCTGGCTACAATCTCACAGGACTCTTTGTGGGCTCTGAGGGGACCCTGG
GCATCATTACATCAACCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCCACCTGTGCGTT
CCCCAGTGTTCAAGCGGCTGTGGACAGCACAGTTCAGATCCTCCAGGCTGCAGTGCCCGTGGCTCGCATT
GAGTTCCTAGATGATGTCATGATGGATGCCTGCAACAGACACAGCAAACTTAACTGCCCCGTGGCACCCA
CGCTTTTCCTGGAGTTCCACGGTTCCCAGCAGACACTGGCGGAACAGCTGCAGCGCACAGAGGCAATCAC
TCAGGATAATGGTGGCTCTCACTTCTCCTGGGCCAAGGAGGCCGAAAAGCGCAATGAACTTTGGGCAGCG
CGGCACAATGCTTGGTATGCAGCCTTGGCCCTGAGTCCAGGAAGTAAGGCCTATTCCACGGACGTGTGTG
TACCCATCTCCCGGCTGCCAGAGATCTTGGTAGAGACCAAGGAGGAGATTAAAGCTTCAAAACTCACAGG
AGCCATCGTTGGGCATGTGGGTGATGGCAACTTTCACTGCATCCTCCTGGTCGACCCAGATGATGCAGAG
GAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAATCTGGGCAGGCGGGCCCTGGCACTCGGTGGGACATGCA
CTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCGTGGGCGTGGA
GACCATGCGGCAGCTCAAAAACACACTGGATCCCCGTGGTCTCATGAACCCAGGCAAAGTGCTATGAGGA
ATGTGTAACCCTTGGCTGGCAATCTCCAGAACACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCC
AACGATCGAGCACGAAATGGAAGGGCTGATGCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA
TGCCTGCCAGGTAGCCTCTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGAAAG
CTGCTACCCTTGTTCTTAGGAGCCTTTTACTCCGGTAGAAAACCCAGGGTGTTTCCCAGTGGGGTGTCTT
CCTGGCTGGCAGAGGTGGTGTGGATCTACTCCAAGCTAAGATCAGATCCCAGATCCGTCTGTGGGGGCCT
CTCCTCTGCTGGTGCCCTGCATCATGACTCACCCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCA
GAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCTTTGGTCACGTGAGCCCCGTTTGCAGC
TGCATCCTTTCCCCCTCTAGGTCTCTTGACCTTGGGCTAAAAAGCATTTGTTTTGGGCCCATCCCCAGAC
TAACTGTAGCCTGGGGAGGGGATGGAGTTCAAGTTTTGGAAGAAAGTCAGTCCCAGCCCCTCTGCTTTTG
CATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGGTCACCTGACAGCTTCCCCACCAGGAAACTGAAGCA
CCTTCTTCAAGCTGTTATGGTGGACAATAGAAATACAGATGAACTAACCTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4235345 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4235345 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_005049 same experiment
 EMAGE:30450 same embryo
 EMAGE:31583 same embryo
 EMAGE:31576 same embryo
 EMAGE:31585 same embryo
 EMAGE:30522 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS