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EMAGE:30829

Plp2 ( MGI:1298382)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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euxassay_004091_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
meckel's cartilage
moderate moderate
regionalmoderate expression: see section 02 03 weak expression: see section 04 05 06 07 08 09 16 17 18 19 20
stomach fundus
strong strong
regionalstrong expression: see section 01 02 03 moderate expression: see section 04 05 06 07 08 09
stomach
strong strong
regionalstrong expression: see section 01
cranium
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 18 19 20 21
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5573
Entity Detected:Plp2, ( MGI:1298382)
Sequence:sense strand is shown

>T5573
ACAGACGGCTGGGTGTGCAGCGACCTCGAACCCGTGAGCCAGAAAGCAGAGCTTCTGCGTCCCAGGGACT
CCAGTACACCACCATGGCGGATTCTGAGCGTCTCTCGGCCCCCGGCTGCTGGTTAGCCTGCACCAGCTTC
TCGCGCACCAAAAAGGGAATTCTCCTGTTTGCTGAGATTATACTGTGCCTGGTGATCTTGATTTGCTTCA
GTGCATCTACAACATCGGCCTACTCCTCCCTGTCGGTGATTGAGATGATCTGTGCTGCTGTCTTACTTGT
CTTCTACACGTGTGACCTGCACTCCAAGATATCATTCATCAACTGGCCTTGGACTGACTTCTTCAGATCC
CTCATAGCAACCATCCTGTACCTGATCACCTCCATTGTTGTCCTTGTAGAAGGAAGAGGCAGCTCCAGAG
TTGTCGCTGGGATACTGGGCTTACTTGCTACGTTGCTCTTTGGCTACGATGCATACATCACCTTCCCTCT
AAAGCAGCAAAGACATACAGCAGCTCCCACTGACCCCACTGATGGCCCGTGATCGTCTTTCAGCTGTCTC
TGCTACCTGTCAATAGCTCCTCCATCAAAAACTTTCCTCCTGTCGGGCGGTGGTGGTGCTCGCCTTTCCT
CCAAGCTCTCAGGAGGCAGAGGCAGGTGGATCCCTGTGAGTTTGAGGCCAGGGCTACACAGTGAGATCCT
GTCTCTAAAACAATTCCTTCTCCGGTTTCCACAACACTCCAGCCAATTCTCTGACCCCATTGAAAGTGCT
TATGGTACAAGAGATTGAACCTAGAGCCGTGTGCATACTAGGCAAGTATTCTCCACTGAGCTACATCCCT
GTAAAAGTGCCTTTATTGGGAGTTTTGTCTTCCAGCCTGCCAATCAACCCATCTGGGTGTGGCCACCTTT
ATGGGTGTGCCTAGATTCCCCTTTGCTCTGCAGTACCAGCAGCCGACATCAGTTCTGCTTGAACCATATC
CCCACATAAGCTACAAAATGAGTGACCCACTACAAATAACCTTTTTCTCTGTGTGGGGTGAGCTGTGAAG
GGCTAAATAAACAATAAAAATAATGTTTAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6477560 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6477560 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004091 same experiment
 EMAGE:29648 same embryo
 EMAGE:30831 same embryo
 EMAGE:29657 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS