Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:31211

H1fx H1 histone family, member X ( MGI:2685307)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211
euxassay_003540_01 euxassay_003540_02 euxassay_003540_03 euxassay_003540_04 euxassay_003540_05
EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211
euxassay_003540_06 euxassay_003540_07 euxassay_003540_08 euxassay_003540_09 euxassay_003540_10
EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211
euxassay_003540_11 euxassay_003540_12 euxassay_003540_13 euxassay_003540_14 euxassay_003540_15
EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211
euxassay_003540_16 euxassay_003540_17 euxassay_003540_18 euxassay_003540_19 euxassay_003540_20
EMAGE:31211 EMAGE:31211 EMAGE:31211 EMAGE:31211
euxassay_003540_21 euxassay_003540_22 euxassay_003540_23 euxassay_003540_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
adrenal medulla
strong strong
homogeneousstrong expression: see section 08 09 10 11 17 18 19 20
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7921
Entity Detected:H1fx, H1 histone family, member X ( MGI:2685307)
Sequence:sense strand is shown

>T7921
GGCCGCTCCCGCCTGGAGCCGCCGCGCGCCCCCAGTCCCCCGGCGCCGCCGCGGCCCCTCGCCTTCCTCT
TCCCGGCGCGGCCCCCCGGCTACCGCGCGCCGCCTGCCGCCAACCCGCTGGCCACCATGTCGGTGGAGCT
TGAGGAGGCCCTGCCGCCAACGAGCGCCGACGGGACGGCCCGCAAGACGGCCAAGGCCGGCGGCTCTGCG
GCGCCCACGCAGCCCAAGAGAAGGAAGAACCGCAAGAAGAACCAGCCAGGCAAGTACAGCCAGCTGGTGG
TGGAGACCATCCGCAAGCTGGGGGAGCGCGGCGGCTCGTCTCTGGCGCGCATCTACGCTGAGGCCAGGAA
GGTGGCATGGTTCGACCAGCAGAACGGGCGCACCTACCTCAAGTACTCTATCCGGGCGCTGGTGCAGAAC
GATACGCTACTGCAGGTGAAGGGCACCGGCGCCAACGGATCCTTCAAGCTGAACCGCAAGAAGCTGGAGG
GCGGCGCGGAGCGGCGCGGAGCTTCGGCGGCCAGCAGCCCCGCGCCCAAGGCGCGCACGGCGGCGGCGGA
CAGAACGCCCGCCAGGCCGCAGCCGGAGCGGCGCGCGCACAAGAGCAAGAAGGCGGCGGCTGCTGCCAGC
GCGAAGAAAGTGAAGAAGGCGGCCAAACCCAGCGTGCCCAAGGTGCCCAAGGGCCGCAAGTGACGCCCCT
ACGGTCTGGCGACATCGTCGAGTTTTCCATCTGTCTCTATCCCTATCCGCCCCCCCCACCCTCGGTGTAC
CGGTTCCGTAGGGTTCCGCCTGGCCCAGGTCCCTGATCCCTGTCCCCTCCCCCGCCCCTCCCCCAGCGAT
GCTGCGTTCTGTTTGCTTTAGGTTTTTGAAACGGCCCTGGCGACGCCCCCATTGGCTCTCACCCTTGGCA
ACGGCCGTCGCCATGGTTACCGGCCCGGCGGCGCCAATGGCCTGGTGGCGCCTGCCTACTGTGCCCGCTG
ATGGCCACCAGGCGCTTGGGTTGTGTGGCGCCTTGCTCCGCCCGCTGCCTTCCTGGGGCGCAATAAACGG
TTCCAACCTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
Notes:The probe template was PCR amplified from IMAGE:6513403 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6513403 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003540 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS