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EMAGE:31240

1810011O10Rik ( MGI:1916318)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31240 EMAGE:31240 EMAGE:31240 EMAGE:31240 EMAGE:31240
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
lower jaw molar
moderate moderate
regionalmoderate expression: see section 08 19 weak expression: see section 20
upper jaw molar
moderate moderate
regionalmoderate expression: see section 08 19
nasal cavity olfactory epithelium
strong strong
regionalstrong expression: see section 08 09 10 11 12 14 15 16 17
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5841
Entity Detected:1810011O10Rik, ( MGI:1916318)
Sequence:sense strand is shown

>T5841
CACATCGATGAAAGCCAAGCCAAGCCATCAAGCCACCAGCATGTCCTCGTCTCTTCGAGTAAGCCCGTCC
ATCCACGGCTACCACTTCGACACAGCCGCTCGCAAGAAAGCTGTGGGCAACATCTTTGAGAACATAGACC
AGGAGTCCCTGCAGAGGCTCTTCAGGAACTCCGGAGACAAGAAGGCAGAGGAGCGGGCCAAGATCATTTT
TGCCATCGACCAAGATTTGGAGGAGAAAACTCGAGCCCTCATGGCCCTGAAGAAGAGGACAAAAGACAAG
CTTCTTCAGTTTCTCAAACTGCGGAAATATTCCATCAAGGTACACTGAGCACAGCAGGCTGGGCAAGAGC
GTATCCACCAATGGACCTTTAAAGACCCAGTGAGCCTGCCAGCTCTGGCACGGGCAGTGTCCCGCGAAAA
GGCTTGAGAGCTTCCTCCGACAGGACCCCGAGGATGGAAAGGGACATACATAACTCACCAGCTACACAGA
CTTGCAACTCATTGCAGCCCTGAGCTGTCCCACTGGGAGCCAAGTGCCTTCAGCAGGCGTTGAGAACTCT
CACAGCAGGAAAGGACATAGCCTGAGAGGATGGAGGCACTGACCAGAACACTGCGTTTGTGGGGACTGAG
TGCACGCACCCAGGGCCGTTGGCAAGGCCCTAAGACTAAACTCAAACCTAACTTGGTTTTTGTTCTTGTT
GTTCGGTTTATTATTTTGTTTTCTTTTTTCTTTTCTTCCTTTTTTCTTTTTTTAAATATTGAAGTGGGGA
GGGAGGGAAGAGAAGGAATATGAAGCATAAGTGGTTTACTGAAGTTTTGTGTGTTTTTTTTTTAAATCTG
AATGTTTAAAAATGTGGCTAAATCTCCGTGCTGTTTATTGGTCAAGATTTTTAGAGATCAGTAATTGTCT
GCTTGCATTGAATACAATGGCTAAGACAGTGCACCCCCTGCTGTTAAAGTCAAAGAACTGGATGCCTGGC
CCAGCCCAGTAAAACCCCACAGCATGGGCTATGTTTCTACAGGATTTGTACACACTTCAAAATGGTTTGC
ACAAAGCTGAAATAATGGGGCCCTTCATAAATCCGAAGGACTGTGAACAACTTTCGAATGTGCTTTTTAA
AACTCTCTGACTAATGCTAAAATCTAATCTAATTAAATGTCCTCCAGACACTGTAGTAAGCATTAGGAAA
TGAATATGGGGGATTTTAGAAGGATGCTGTGGGTTTTTTAAAATTATTTATTATGCATTGTAAGTGATAC
ATAGCCCTAATAAATTATTATCAACTTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3154083 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3154083 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002675 same experiment
 EMAGE:30142 same embryo
 EMAGE:30234 same embryo
 EMAGE:30211 same embryo
 EMAGE:31595 same embryo
 EMAGE:30226 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS