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EMAGE:31282

Tmprss11d ( MGI:2385221)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282
euxassay_013788_01 euxassay_013788_02 euxassay_013788_03 euxassay_013788_04 euxassay_013788_05
EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282
euxassay_013788_06 euxassay_013788_07 euxassay_013788_08 euxassay_013788_09 euxassay_013788_10
EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282
euxassay_013788_11 euxassay_013788_12 euxassay_013788_13 euxassay_013788_14 euxassay_013788_15
EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282 EMAGE:31282
euxassay_013788_16 euxassay_013788_17 euxassay_013788_18 euxassay_013788_19 euxassay_013788_20
EMAGE:31282 EMAGE:31282
euxassay_013788_21 euxassay_013788_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
oral epithelium
strong strong
regionalstrong expression: see section 10 11 12 13 14 15 16
esophagus epithelium
strong strong
regionalstrong expression: see section 10 11 12
anterior naris epithelium
strong strong
regionalstrong expression: see section 13 14 15 16 17 18
external naris epithelium
strong strong
regionalstrong expression: see section 13
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7152
Entity Detected:Tmprss11d, ( MGI:2385221)
Sequence:sense strand is shown

>T7152
CAGAAACACGGACCACTTCATTATTCAAGAGTAAAATGTATAGGCCAAGACCAATGCTATCACCGTCAAG
ATTCTTCACTCCCTTTGCAGTAGCTTTCGTTGTCATAATAACGGTAGGGCTCCTGGCCATGATGGCAGGT
CTACTTATTCACTTTTTAGCTTTTGACAAGAAAGCTTACTTTTATCATAGCAGCTTTCAAATCCTAAACG
TTGAATACACTGAGGCTTTAAACTCACCAGCTACACACGAATACAGAACCTTGAGTGAAAGAATTGAGGC
TATGATTACTGATGAATTTCGAGGATCAAGTCTAAAAAGTGAGTTTATCAGGACACATGTTGTCAAACTA
AGAAAAGAAGGGACTGGTGTGGTTGCGGATGTTGTCATGAAATTTCGATCTAGTAAACGTAACAACAGAA
AGGTAATGAAAACCAGAATTCAATCTGTGCTACGAAGACTCAGCAGCTCTGGAAACTTGGAAATAGCCCC
TTCGAATGAGATAACATCACTCACTGACCAGGATACTGAAAATGTTTTGACTCAAGAATGTGGAGCACGT
CCAGACCTTATAACACTGTCAGAAGAGAGAATCATTGGAGGCATGCAAGCTGAGCCCGGTGACTGGCCCT
GGCAAGTCAGTCTACAGCTCAATAATGTCCACCACTGTGGAGGTGCCCTGATCAGTAACATGTGGGTCCT
GACAGCAGCTCATTGCTTCAAAAGCTATCCTAATCCTCAATATTGGACAGCCACCTTTGGGGTTTCTACA
ATGAGCCCTAGGCTGAGAGTGAGAGTAAGGGCTATTTTAGCCCACGATGGGTACAGCTCCGTAACTCGTG
ACAATGACATCGCAGTTGTACAACTTGACAGATCTGTCGCCTTTTCCAGAAATATCCATAGGGTATGTCT
CCCAGCAGCAACCCAAAATATCATCCCTGGTTCTGTCGCATATGTTACAGGATGGGGATCTCTCACATAT
GGAGGCAACGCAGTCACAAATCTACGGCAAGGAGAGGTCAGAATAATAAGTTCAGAGGAATGCAATACGC
CAGCTGGTTACAGTGGAAGTGTCTTGCCAGGAATGCTGTGTGCTGGAATGCGTTCAGGGGCCGTGGATGC
ATGCCAGGGTGATTCAGGTGGCCCGCTAGTACAAGAAGACTCAAGGCGGCTTTGGTTTGTTGTGGGCATT
GTGAGCTGGGGATATCAGTGTGGCCTCCCAAATAAGCCAGGCGTGTATACTCGAGTGACAGCCTACCGCA
ACTGGATCAGACAGCAGACGGGAATCTAGTGCAACCGAGGAAAAAACATGCCATGAGGTCTGTATCCGAG
TGTGACTGACTCGGATGCCATGACTTCACATTTCAACTGCAAAGGAAACTGGAAATGCCCCTTCTGAACG
TCCCATTACATAAATATGGTTTAACTGTTTAGTATTTCTTTGTCGGTACAGATTTTTACTTTCTTGAGAA
AAAGAAAAAAAAAACATGGACATGGCTAAGTAAGAATTATGTTAGGCTAGTAACAGGAAGATGTTTATTA
CATAGGTGGTCAGGTGTAGTAGTGAGAAGTCAGGTACATTAAGTCGGTAATTTACAGAAAATAATGTCAG
GTAGTCCTAACGTTAAATATGTGAGGCCACAGAACAAATAGTGTTAGAACTGTAGCCATCCCAAGTATTT
AACATTTGTTTTCAAGTGAAACTAAGAAACAGACTTACAAATAGTTTTAATGGTGAATTTTCATTTTAAA
TATTTTAACTACATAGAAAAGACATATCTCCTTCATGAAGAAGCTGAGGTGATGAATCAACACAGCCTCT
TCAGCTATGTTTGCAACCACAAGATTTGTGGGAAAGAAATCCCTACTACCAACTTCCTACTGTTGGCATT
ATTTTTTAGAGTAACACGACGCACAATAGCAAAATTTAAGTAACAAATTAAAAGTTAATGATGAAGAAGA
AGTAAAGAGTTTGTTTGCAAAGACAAAAATTAAACAGATTAATATCAATAAATCTGGAGACAGAAGGATC
TCAGATTCATATTCTCTGTAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4021767 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4021767 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_013788 same experiment
 EMAGE:31280 same embryo
 EMAGE:30305 same embryo
 EMAGE:31284 same embryo
 EMAGE:31283 same embryo
 EMAGE:31277 same embryo
 EMAGE:31303 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS