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EMAGE:31638

Gpx3 ( MGI:105102)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638
euxassay_003296_01 euxassay_003296_02 euxassay_003296_03 euxassay_003296_04 euxassay_003296_05
EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638
euxassay_003296_06 euxassay_003296_07 euxassay_003296_08 euxassay_003296_09 euxassay_003296_10
EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638
euxassay_003296_11 euxassay_003296_12 euxassay_003296_13 euxassay_003296_14 euxassay_003296_15
EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638 EMAGE:31638
euxassay_003296_16 euxassay_003296_17 euxassay_003296_18 euxassay_003296_19 euxassay_003296_20
EMAGE:31638 EMAGE:31638
euxassay_003296_21 euxassay_003296_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
left atrium
strong strong
regionalstrong expression: see section 06 07 08 09 10
hindgut
strong strong
regionalstrong expression: see section 10 moderate expression: see section 11 12 13 14 15 16 17
foregut-midgut junction
moderate moderate
regionalmoderate expression: see section 14 15
lower jaw incisor
moderate moderate
regionalmoderate expression: see section 09 10 11 15 16 17
stomach
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 09 10 moderate expression: see section 08
upper jaw incisor
moderate moderate
regionalmoderate expression: see section 09 10 11 15 16 17
midgut
strong strong
regionalstrong expression: see section 10 moderate expression: see section 11 12 13 14 15 16 17 18 19 20 21
right atrium
strong strong
regionalstrong expression: see section 13 14 15 16 17 18 moderate expression: see section 19
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5659
Entity Detected:Gpx3, ( MGI:105102)
Sequence:sense strand is shown

>T5659
CGCGCCCCAGCCCGCCATGGCCCGGATCCTCCGGGCATCCTGCCTTCTGTCCCTGCTCCTGGCCGGGTTT
GTTCCGCCGGGCCGGGGACAAGAGAAGTCTAAGACAGACTGCCATGGCGGTATGAGTGGTACCATCTACG
AGTATGGAGCCCTCACCATCGATGGGGAGGAATACATTCCTTTTAAGCAGTATGCAGGCAAATATATCCT
CTTTGTCAACGTAGCCAGCTACTGAGGTCTGACAGACCAATACCTTGAACTGAATGCACTACAAGAAGAA
CTTGGGCCATTTGGCTTGGTCATTCTGGGCTTCCCTTCCAACCAATTTGGCAAACAGGAGCCAGGCGAGA
ACTCGGAGATACTCCCCAGTCTCAAGTATGTTCGACCAGGTGGGGGCTTTGTGCCTAATTTCCAGCTCTT
TGAGAAAGGAGATGTGAACGGGGAGAAAGAGCAGAAATTCTACACTTTCCTGAAGAACTCCTGCCCTCCC
ACTGCAGAACTCCTGGGCTCACCTGGCCGCCTCTTTTGGGAACCCATGAAGATCCATGACATCCGCTGGA
ACTTTGAGAAGTTCCTGGTGGGGCCAGATGGCATACCGGTTATGCGCTGGTACCACCGGACCACAGTCAG
CAACGTCAAGATGGACATCCTGTCTTACATGAGGCGGCAGGCAGCCCTGAGCGCCAGGGGGAAGTAACTG
ATGCCCCCACCCTACCCCTACCCCCTGCCCATCATGCAAGGGCCGAGGAGGGGCTCTTCAGGAAGGAAGC
CACATTCCCAGTCATTCTACCCCCACCCCAGATTCTCTTTCTTATTACATAAAAGACAAGCCTGGCACAA
CTGTGTGTCTGAACCACTGTGGACACGTGACAATTGTCCCAGTGTGTGCATGGCTACACAGCCACGTATC
TGCCTGCTTGAAACCCAGGGATGGTCCATCTGTGTTTACGGCTTGGCACAACACCCTCATATTTTTTTCA
GCTTTCTGTTCCAAATGAGCCCAAAGGAAACACAAGTTCTAGGTCCAATGGTTCTGCTCAAACCTGAACA
TCATTCTTGGGGCCAGCATCTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTGAAG
GACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAGCGCGATG
GCCGTGTACCCCAGGTCAGGGGTGGTGTCTCTATGAAGGAGGGGCCCGAAGCCCTTGTGGGCGGGCCTCC
CCTGAGCCCGTCTGTGGTGCCAGCCCTTAGTGCATTCAGGCTTAGGCTCCCAGGCAGGGACACTACCCCC
GCGCCTCTGGAGGACATGCTATCCTCTCACTCTGTCCACTGGTATCTCAACACCCCCATCTGCCCAGTAA
AGGTCTTTCTGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6528998 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6528998 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003296 same experiment
 EMAGE:31015 same embryo
 EMAGE:31012 same embryo
 EMAGE:29303 same embryo
 EMAGE:29305 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS