EMAGE mouse gene expression spatial database

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EMAGE:31726

Tspan33 tetraspanin 33 ( MGI:1919012)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


euxassay_000428_01	euxassay_000428_02	euxassay_000428_03	euxassay_000428_04	euxassay_000428_05

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euxassay_000428_11	euxassay_000428_12	euxassay_000428_13	euxassay_000428_14	euxassay_000428_15

euxassay_000428_16	euxassay_000428_17	euxassay_000428_18	euxassay_000428_19	euxassay_000428_20

euxassay_000428_21	euxassay_000428_22	euxassay_000428_23	euxassay_000428_24

View assay images:
Expression pattern clarity:

Expression Pattern Description

Text Annotation:

Structure

Level

Pattern

Notes

liver lobe

strong

homogeneous

strong expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24

Annotation Validation:

text annotation by author

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T452
Entity Detected:	Tspan33, tetraspanin 33 ( MGI:1919012)
Sequence:	sense strand is shown >T452 TCNACCTGTTGGCCTACTGGTTACCATGGCGACGAGCATCTCACGGACCAGCAGCAGAGGGTGCTGAGAG CACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCA GGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCATTGTCCGAGG TTTATTTCATGCTGTTTGTAACCTTGAACATTTGAGTTTGTGTTTTTAGTTTCCTCTGGGCAGAGGTGTG GAAACTGCAGCGGCACAGAAAGCTGTAGGATTACTAGCTGCATACTGAGGCACAACAGACAGCTCTGTTA GGGCTGCTGCTGAGCTAGGTGGACAGAGTCTGCTGCCAGGGAGTCCTGGCTGTGCACAGATACTGGCAGC CCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGA GCCTAGGGAACCTAGGGGTCGGATCGGGACCGCAGGGCACATGGGGGATAGGAGTGA
Notes:	The probe template was PCR amplified from IMAGE:1432795 using vector specific primers. Forward Primer - name:T7-pME18S-FL3-fw, sequence:CGTAATACGACTCACTATAGGGCCTTCTGCTCTAAAAGCTGCG; Reverse Primer - name:T3-pME18S-FL3-rv, sequence:CAAATTAACCCTCACTAAAGGGCGACCTGCAGCTCGAGCAC. Anti-sense probe was then transcribed from the PCR amplified template usi. T3 polymerase. EMAGE Editor's Note: the partial probe sequence indicated here was given by the EURExpress Consortium and has been checked using BLAST comparison against all available partial insert sequences of IMAGE:1432795 from NCBI. In cases where no BLAST hit was found (because the two sequence reads are found at opposing ends of the insert sequence), both end sequences were then checked against the appropriate cDNA RefSeq to ensure validity of the information.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EurExpress:euxassay_000428 same experiment
	EMAGE:29686 same embryo
	EMAGE:31677 same embryo
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source