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EMAGE:31844

Ptf1a pancreas specific transcription factor, 1a ( MGI:1328312)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
pancreas
strong strong
regionalstrong expression: see section 09 10 11 12 13 moderate expression: see section 14 15 16 17 18
medulla oblongata basal plate ventricular layer
moderate moderate
regionalmoderate expression: see section 17 weak expression: see section 10
rest of cerebellum ventricular layer
moderate moderate
regionalmoderate expression: see section 21 weak expression: see section 04 05 06 07 08 09 10 11 13 15 16 20 22 23
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T55164
Entity Detected:Ptf1a, pancreas specific transcription factor, 1a ( MGI:1328312)
Sequence:sense strand is shown

>T55164
GGATCACTCACAAAGCGTCACCCCGAGCAGCCCATTCGTCCTTCCGGGCCTCGGCGGCCGAGGGCATGGA
CGCCGTACTCCTGGAGCACTTCCCCGGGGGCCTGGACACCTTCCCATCCCCTTACTTTGATGAGGAAGAT
TTCTTCACCGACCAGTCCTCTCGGGACCCGCTGGAGGACAGCGACGAGCTGCTGGGGGACGAGCAAGCAG
AAGTAGAGTTCCTCAGCCACCAGCTACACGAATACTGCTACCGCGACGGGGCGTGCCTGCTGCTGCAACC
CGCGCCCTCGGCCGCCCCGCACGCGCTCGCCCCACCGCCTTTGGGGGATCCTGGCGAGCCCGAGGACAAC
GTCAGTTATTGCTGCGATGCAGGGGCTCCTCTCGCTGCCTTCCCCTACTCGCCTGGCTCACCGCCCTCGT
GCCTCGCCTACCCGTGTGCCGCGGTGCTGTCCCCCGGTGCGCGGCTCGGTGGTTTGAACGGGGCTGCGGC
AGCGGCGGCAGCAAGGCGGCGGCGACGCGTGCGCTCCGAGGCGGAGCTGCAGCAGCTGCGACAAGCCGCT
AATGTGCGAGAGCGGCGCCGCATGCAGTCCATCAACGACGCCTTCGAGGGGCTGCGTTCGCACATCCCCA
CGCTACCCTACGAAAAGCGCCTCTCCAAAGTAGACACGCTGCGCTTGGCCATAGGCTACATTAACTTCCT
CAGCGAGCTGGTGCAAGCCGACCTGCCGCTGCACGGGAGTGGCGCAGGTGGTTGCGGGGGCCCAGGTGGC
AGCCGGCACCTCGGAGAGGACAGTCCCGGTAACCAGGCCCAGAAGGTTATCATCTGCCATCGAGGCACCC
GTTCACCCTCCCCCAGTGACCCGGATTATGGTCTCCCTCCTCTTGCAGGGCACTCTCTTTCCTGGACTGA
TGAAAAACAGCTCAAAGAACAAAATATCATCCGTACAGCTAAAGTGTGGACCCCAGA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019488 same experiment
 EMAGE:12081 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS