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EMAGE:31910

Nat5 ( MGI:1915127)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
submandibular gland primordium
moderate moderate
regionalmoderate expression: see section 07 08 09 16 17 18 19 20
vibrissa
moderate moderate
regionalmoderate expression: see section 07 19 20 21 22
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6758
Entity Detected:Nat5, ( MGI:1915127)
Sequence:sense strand is shown

>T6758
GGTTGGAGGCTGGCGGCGGCGCAATGACCACGCTCCGGGCCTTCACCTGCGACGACCTGTTCCGCTTCAA
CAACATTAACTTGGATCCACTTACAGAAACTTATGGGATTCCTTTTTACTTACAGTACCTTGCGCACTGG
CCAGAGTATTTCATCGTCGCTGAAGCACCTGGCGGAGAACTAATGGGTTATATTATGGGCAAAGCAGAAG
GCTCAGTAGCTAGGGAAGAATGGCATGGACATGTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCT
TGGCTTGGCTGCTAAACTTATGGAGTTACTAGAAGAAATTTCAGAAAGAAAAGGTGGATTTTTTGTTGAT
CTCTTCGTAAGAGTATCCAATCAAGTTGCCGTCAACATGTACAAGCAGTTGGGTTACAGTGTCTACAGGA
CAGTCATAGAGTACTACTCAGCCAGCAATGGGGAGCCTGATGAGGATGCCTATGATATGAGGAAAGCACT
TTCCAGGGACACTGAGAAGAAATCCATCATCCCATTACCTCATCCCGTGAGGCCTGAGGACATTGAATAA
CCATAGGCAGTGGTTCTTAGGCAGGTGTTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATCTT
GGAGCTCTATTAGGAGGAAAGTAAGCATTTAAGTCTTAAAGACTTCAAAAAATGCAGGCTATAAACTTCA
AATCTCATCCTTCCAATGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGC
AGCTAAGTCAGAAGGACTCGTTCCACTATCATGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCC
TCCTCCTAAATCCTGTGCCTGAGAACCACTGCTGCACATATATAAATATATATATATTTTATTTTGTATT
GATCTGTTAATTGAAGCTTTAAAAGCATATATGAAATGTATAAATCTGAGATGTATAGTAAAACATTGTT
GACTATGAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3673241 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3673241 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006945 same experiment
 EMAGE:32197 same embryo
 EMAGE:31939 same embryo
 EMAGE:31828 same embryo
 EMAGE:32217 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS