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EMAGE:4225

Smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) ( MGI:1915546)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4225
Fig2D(full embryo from supporting data). Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2003.11.024] Dev Biol 268: 24-38, Powles N; Babbs C; Ficker M; Schimmang T; Maconochie M, Identification and analysis of genes from the mouse otic vesicle and their association with developmental subprocesses through in situ hybridization. Copyright 2004

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4225Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4225_wholemount_strong_3D_1.wlz
4225_wholemount_moderate_3D_1.wlz
4225_wholemount_weak_3D_1.wlz
4225_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4225_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
otocyst
detected detected
regionalOtic vesicle; dorsally restricted expression.
endolymphatic appendage
detected detected
Endolymphatic duct.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3505894
Entity Detected:Smu1, smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) ( MGI:1915546)
Notes:The Smu1 probe used in this study by Powles et al., 2004 [PMID:15031102] was generated from clone np232, the insert of which is of unpublished sequence, yet the authors state has 100% identity to 2610203K23Rik/Mm.76278. Editors Note: 2610203K23Rik is a synonym for Smu1 and UniGene cluster Mm.76278 has been retired and replaced by Mm.289929 (Smu1).
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:involves: C57BL/6 * CBA
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Powles N; Babbs C; Ficker M; Schimmang T; Maconochie M, 2004 [PMID:15031102] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.ydbio.2003.11.024] [ PMID:15031102] Powles N, Babbs C, Ficker M, Schimmang T, Maconochie M 2004 Identification and analysis of genes from the mouse otic vesicle and their association with developmental subprocesses through in situ hybridization. Dev Biol (268):24-38
Links:MGI:3510321 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI