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EMAGE:4760

Patz1 POZ (BTB) and AT hook containing zinc finger 1 ( MGI:1891832)
TS18 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4760
Fig3A. Kobayashi A; Yamagiwa H; Hoshino H; Muto A; Sato K; Morita M; Hayashi N; Yamamoto M; Igarashi K. A combinatorial code for gene expression generated by transcription factor Bach2 and MAZR (MAZ-related factor) through the BTB/POZ domain. Mol Cell Biol 2000 Mar;20(5):1733-46. [PMID:10669750] .

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4760Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4760_wholemount_moderate_3D_1.wlz
4760_wholemount_weak_3D_1.wlz
4760_wholemount_possible_3D_1.wlz
4760_wholemount_notDetected_3D_1.wlz
4760_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4760_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
forelimb bud
strong strong
gradedExpression increases towards the edges of limb buds, where the AER is located.
hindlimb bud
strong strong
gradedExpression increases towards the edges of limb buds, where the AER is located.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Patz1 probeA
Entity Detected:Patz1, POZ (BTB) and AT hook containing zinc finger 1 ( MGI:1891832)
Sequence:sense strand is shown

>Patz1 probeA
GGCGTGTGCGCTGGGCGCACCTGAGAGTACTACCGAGCCCTGGGCCGCACGTGCGGGGAGTGTGAGTGGT
CCGCTGCAAAAGGCGTCTCGCTGCCTAAGGGAAGGGACCAGGGACTGGCGGGTGCCCGGCCCGGCGAGTG
GGGAAGGGGCAGCGACCATGGAGCGGGTCAACGACGCTTCTTGCGGTCCGTCGGGCTGCTACACCTACCA
GGTGAGCAGACACAGTACGGAGATGCTGCACAACCTGAACCAACAACGCAAAAACGGCGGGCGCTTTTGC
GACGTGCTCCTACGAGTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTACTGGCTGCCTGCAGCGAGT
ACTTTGAGTCTGTGTTCAGCGCCCAGTTAGGCGACGGCGGAGCTGCAGATGGTGGTCCTGCTGATGTGGG
AGGCGCGGCGGCGGCTCCAGGCGGCGGAGCTGGAGGCAGCCGCGAACTGGAGATGCACACCATCAGTTCC
AAAGTGTTCGGAGACATCCTGGACTTCGCTTATACGTCCCGAATCGTTGTGCGCCTAGAGAGCTTCCCCG
AGCTCATGACGGCCGCCAAGTTCCTGCTGATGAGGTCGGTCATCGAGATCTGCCAGGAAGTAATCAAACA
GTCCAACGTGCAGATCCTCGTGCCCCCTGCCCGGGCTGATATCATGCTCTTTCGCCCACCTGGGACTTCT
GACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCATGGCAGCCAACAGTAACGGTATTGCTGGCA
GTATGCAGCCCGAGGAGGAGGCTGCCAGGGCCACAGGTGCTGCTATTGCGGGCCAAGCTTCTCTGCCTGT
GTTACCCGGGGTGGACAGATTGCCCATGGTGGCTGGACCCCTATCCCCCCAACTACTGACTTCTCCGTTC
CCTAATGTGGCATCCAGTGCACCTCCACTAACTAGCAAGCGAGGCCGGGGACGCCCCAGGAAGGCCAACC
TGCTGGACTCCATGTTTGGGTCTCCAGGGGGCTTGAGGGAAGCAGGCATCCTTCCATGTGGCCTGTGCGG
GAAGGTGTTCACTGACGCCAACCGGCTCCGGCAACATGAGGCCCAGCACGGCGTCACAAGCCTCCAGTTG
GGCTATATCGATCTTCCTCCTCCAAGGCTGGGTGAGAATGGGTTACCCATCTCCGAGGACCCCGATGGCC
CCAGAAAAAGGAGCCGGACCAGAAAGCAAGTGGCTTGTGAGATCTGTGGCAAGATCTTTCGTGACGTATA
CCATCTCAACCGGCATAAGCTTTCCCACTCGGGGGAGAAGCCGTACTCGTGCCCGGTGTGTGGTCTGCGG
TTCAAGAGAAAAGACCGAATGTCGTACCATGTGAGGTCCCATGATGGGTCAGTGGGCAAACCGTACATCT
GCCAGAGCTGTGGGAAAGGTTTCTCCAGGCCAGATCACTTGAATGGACATATCAAGCAGGTGCACACTTC
TGAGCGACCTCACAAGTGTCAGACCTGCAATGCCTCCTTTGCGACTCGAGACCGCCTGCGCTCCCACCTG
GCCTGTCATGAAGACAAGGTGCCCTGCCAGGTGTGTGGAAAGTACTTGCGGGCCGCATACATGGCAGACC
ACCTGAAGAAGCACAGTGAGGGGCCCAGCAACTTCTGTAGCATCTGTAACCGAGAAGGCCAGAAATGCTC
ACATCAGGATCTGATTGAGAGCTCCGACTCCTACGGTGACCTCTCCGACGCCAGCGACCTGAAGACGCCA
GAGAAACAGAGTGCCAACGGCTCCTTCTCCTGCGACGTGGCAGTCCCTAAAAACAAAATGGAGTCTGACG
GGGAGAAGAAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGTTCTAAGTCCTACTTGAACAAACACAT
CCAGAAGGTGCATGTCCGTGCCCTTGGGGGTCCCTTGGGGGACCTGGGCCCTGCCCTTGGTTCACCTTTC
TCTCCCCAGCAGAACATGTCTCTTCTTGAGTCCTTTGGATTTCAGATTGTTCAGTCAGCGTTTGCATCAT
CTTTAGTGGATCCTGAGGTGGACCAGCAGCCCATGGGGCCTGAAGGGAAGTGAGACATGCTGTGTCCCCA
CAGAACAGCCGCTGGGGACTGCTGAGCAATGCTGTGAATGCAGAGGGAAGTGATGTCTTTGGGTTCTGTA
GCTGAGAGATTTTTATTCATTTTTAAACCCCATCCCTGCCCCTCCCTCCCTCCATTAACCCCACCTGCTG
TGGTCTTAGAAACAGACTCTCATCTGATACTCTCTGTAGAAATACTGAGAGACCCAATATGGGGCAAGGG
CAGAAAGCACTACATCGGCCTCTGAGGCAGTACCAGTTCTGGTTTCTCTAGTGGTCTGAAGCCAGAATTT
CTGGTGCTCAAGTTATTGGTGGCCTCACCCCAACTTTTAAGGCACTCTTGGCCTCGCTTGGTAAGTTTTG
GTCCCACTTCTTTCATTCCTCACCCCCCTGCCTCTGTCCTCAAAAGAAGTTAAGTAGGGTCTCTACCCTC
TTATGGCCAACTATTTTTAAGGAAGCCAGAA
nt 1 - nt 2551 of AB029397.1
Notes:The Patz1 (Mazr) probe template used in this study by Kobayashi et al., 2000 [PMID:10669750] is described as a "full length of cDNA". Editors Note: See Fig 1A and AB029397 for the 'full length' sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Kobayashi A; Yamagiwa H; Hoshino H; Muto A; Sato K; Morita M; Hayashi N; Yamamoto M; Igarashi K, 2000 [PMID:10669750] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1128/MCB.20.5.1733-1746.2000] [ PMID:10669750] Kobayashi A, Yamagiwa H, Hoshino H, Muto A, Sato K, Morita M, Hayashi N, Yamamoto M, Igarashi K 2000 A combinatorial code for gene expression generated by transcription factor Bach2 and MAZR (MAZ-related factor) through the BTB/POZ domain. Mol Cell Biol (20):1733-46
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE