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EMAGE:6873

Mkrn2 makorin, ring finger protein, 2 ( MGI:1914277)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873
"Pseudo-wholemount" of euxassay_002542. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002542_01 euxassay_002542_02 euxassay_002542_03 euxassay_002542_04
EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873
euxassay_002542_05 euxassay_002542_06 euxassay_002542_07 euxassay_002542_08 euxassay_002542_09
EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873
euxassay_002542_10 euxassay_002542_11 euxassay_002542_12 euxassay_002542_13 euxassay_002542_14
EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873 EMAGE:6873
euxassay_002542_15 euxassay_002542_16 euxassay_002542_17 euxassay_002542_18 euxassay_002542_19
EMAGE:6873 EMAGE:6873 EMAGE:6873
euxassay_002542_20 euxassay_002542_21 euxassay_002542_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:6873Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
6873_wholemount_strong.wlz
6873_wholemount_moderate.wlz
6873_wholemount_weak.wlz
6873_wholemount_possible.wlz
6873_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:6873_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5059
Entity Detected:Mkrn2, makorin, ring finger protein, 2 ( MGI:1914277)
Sequence:sense strand is shown

>T5059
CCACGCGTCCGGGCCACGGCGCTGGCGGCTCTGAGGTTTCAGTGCGACTCCAGCCCGTGGCCCCGCCGCC
ATGAGCACCAAGCAGGTCACCTGCAGGTATTTTATGCATGGCGTATGTCGCGAAGGCAGCCAGTGCCTGT
TCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCTA
TGGTGCACGCTGCAGATATGATCATACAAAGCCCCCAGCTGCAGCAGGTGGAGCTGTGGGTCCTGCACCC
AACCCTTCGCCCTCCTCAGGCCTGCATAGTCCTCACCCTTCTCCTGACATTGCCACATCTGTTATGAGGA
CACATTCGAATGAACCTGGAAAACGGGAGAAGAAGACGCTGGTGCTCAGAGACCGCAATCTCACTGGTCT
GGCTGAAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGCCCA
GAGATGAAGCCCCATTCCTACCTAGATGCCATCAGGACTGGCCTGGATGACTTGGAGGCCAGCAGCTCCT
ACAGCAATGAGCCGCAGTTGTGCCCCTATGCTGCCGCTGGGGAGTGTCGCTTTGGAGATGCCTGTGTCTA
CCTGCATGGGGACATGTGTGAGATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAA
GCTCACGAGAAGATGTGTATGTCGACATTTGAACATGAGATGGAAAAGGCGTTTGCCTTCCAGGCGAGCC
AGGACAAAGTGTGCAGCATCTGCATGGAGGTGATCCTGGAGAAAGCATCTGCTTCTGAAAGGAGGTTTGG
CATTCTCTCCAACTGCAGCCACACCTACTGCCTGTCCTGCATCCGTCAATGGAGATGTGCCAAGCAGTTT
GAAAACCCAATCATAAAGTCTTGTCCAGAGTGCCGTGTGATATCAGAGTTTGTAATTCCAAGTGTGTATT
GGGTAGAAGATCAGAATAAAAAGAATGAATTAATTGAAGCTTTCAAACAGGGAATGGGGAAGAAGGCATG
CAAATACTTTGAACAAGGCAAGGGGACCTGCCCCTTTGGAAGCAAGTGCCTTTACCGTCATGCTTACCCT
GATGGGCGGCTGGCAGAGCCAGAGAAACCTCGGAAGCAGCTAAGCTCTGAAGGCACTGTGAGGTTCTTTA
ACTCAGTTCGGCTTTGGGATTTTATCGAGAACCGAGAAACCCGGCAAGTCCCCAGCACTGACGATGTGGA
TGTGACAGAGCTAGGAGACCTCTTCATGCACCTTTCTGGAGTAGAATCATCAGAACCCTAGTCAGTGCTG
ACGCCTTCATTTGGCTCTGCAGTCAACTTTCCAAGGCACGGTGTGGACGCATCTGTCACCGACCCGAGGT
GACGTGGTACTGGGATGTGAGTGCAGTAGTGAGTCCCCCTGGGAAGGGAAGGGAGATCACCACGTCCACA
GAATCACTACATTTAGAGTTGAGCTCTCAGTTGTACCTCCAACCCCTTTCTCCGGGACCAGCTATGTGGT
CCAGCTGTTTTAATTGAGTGCTTTTAAATGAAACCTGACTGCCATCTTTCTTTTGTGACTTTCTTCCTTA
AGCAACAGTAAACTTGCAGCAGATAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5320887 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5320887 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:6874 same embryo
 EMAGE:6872 same embryo
 EMAGE:6877 same embryo
 EMAGE:6875 same embryo
 EMAGE:6876 same embryo
 EurExpress:euxassay_002542 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS