Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7535

Wdr85 WD repeat domain 85 ( MGI:1914478)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535
"Pseudo-wholemount" of euxassay_004637. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004637_01 euxassay_004637_02 euxassay_004637_03 euxassay_004637_04
EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535
euxassay_004637_05 euxassay_004637_06 euxassay_004637_07 euxassay_004637_08 euxassay_004637_09
EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535
euxassay_004637_10 euxassay_004637_11 euxassay_004637_12 euxassay_004637_13 euxassay_004637_14
EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535 EMAGE:7535
euxassay_004637_15 euxassay_004637_16 euxassay_004637_17 euxassay_004637_18 euxassay_004637_19
EMAGE:7535 EMAGE:7535 EMAGE:7535
euxassay_004637_20 euxassay_004637_21 euxassay_004637_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7535Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7535_wholemount_strong.wlz
7535_wholemount_moderate.wlz
7535_wholemount_weak.wlz
7535_wholemount_possible.wlz
7535_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7535_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7702
Entity Detected:Wdr85, WD repeat domain 85 ( MGI:1914478)
Sequence:sense strand is shown

>T7702
GTGACTGAGGGAAGTGGAGAGAGAGTGTGGCGCATGCATCCTTTGGTTCTGGCTCAATGGCGGGTAGCCA
CGCAGGGACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTTACCGCGGACTCGGTGGAATGGTGCCCA
GTAGAAGGTTACCAGCATCTGCTGGCCTGCGGAACCTACCAGCTGCGAGCGCCCAGGGACCAGCCTGCAC
TGGATGGCAGTGAGCCTCAAGTTCGTTTAGGTCGTCTCTACCTGTTCAGCTTCAGTGAGCACAACACGGC
TAAACCTCTGCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCACATCCCA
GTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAAT
GTGAGTAGAACAACAGTTACACCCTGCAGCCAATATCCAGCCTCGCCCTGGATGAGAATTGTCTGTCCTT
GTCAATGGATTGGTCCACTGGGAAATCTGTCAGGGCCAGAGAACAGCCCTTGAAGATCATTAGCAGTGAT
TCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGAACTACAGCTAGTAGCATCTTGGC
CAGCCCATCACTTTGAGGCCTGGATTGCTGCTTTCAATTACTGGCAGACAGAACTCGTGTATTCAGGGGG
AGATGACTGCCTTCTGAGAGGCTGGGACACTAGGATGCTGGGCACACCTGTCTTCACTAGCAAAAGACAT
TGCATGGGTGTGTGCAGCATCCAGAGCAGCCCCCATCAGGAGCATATACTGGCAACTGGAAGCTATGATG
AGCATGTTCTGCTGTGGGACACTCGAAACATAAGACAGCCATTGGCGGATGTACCAGTGCAAGGAGGTGT
GTGGAGGCTCAAGTGGCACCCAGTTCACCACCATCTACTCCTGGCGGCCTGCATGCACAATGGCTTCAAG
ATTCTCAACTGCCAGAAGGCCATTGAGGAGAAGCAGGACATAACTGTTTTAACATCCCACGAAATGCCTA
ACTCATTAGTATATGGGGCTGACTGGTCCTGGCTTTTCCATTCCATGAAGCCCACTCCTACCTGGTTCTT
TGATCAGAATGACATGGGAGTCAAAGCAGCAGACCACTCTAGCCTAAAGGTCACAGAGGAGCCACCAATA
CATTCTCAGGAACAAACCATGGATCGCCAAGTGGAAGGCCCCGCTAACGCTCATACCAGAGCTGAACTGA
AGGCTTCTCTCCTTCCATTAACAGAGGACATGAAAAACAGCAAAGACTGCTCCTCATCCTCAGTCAAGAC
TCGTGATCTTAGCCACTGCTCTGGTGGGCAGAGCTTTGACAATAGCCTCCTGGCCACCTGCTCCTTTTAT
GACCATGTTCTCCACCTTTGGAAGTGGGAGACGAATCAAGCTCGCACTCTTTGCAGTGGCACTGGATGTG
ATTTGGGGAGTGCTGACCATTGAGAATGGACTCTTGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTAC
AACTAAGTGTTCTGGGTATATTTTGACTTTCAGCTCTTCATTTGTATTAAGTCCCTGCTTACATTAAATA
ACTTTTTTTTTTTTTTTTAATTTTAGAAATCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6307251 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6307251 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7537 same embryo
 EMAGE:7540 same embryo
 EMAGE:7536 same embryo
 EMAGE:7539 same embryo
 EMAGE:7538 same embryo
 EurExpress:euxassay_004637 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS