Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7642

Dll1 delta-like 1 (Drosophila) ( MGI:104659)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642
"Pseudo-wholemount" of euxassay_004715. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004715_01 euxassay_004715_02 euxassay_004715_03 euxassay_004715_04
EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642
euxassay_004715_05 euxassay_004715_06 euxassay_004715_07 euxassay_004715_08 euxassay_004715_09
EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642
euxassay_004715_10 euxassay_004715_11 euxassay_004715_12 euxassay_004715_13 euxassay_004715_14
EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642
euxassay_004715_15 euxassay_004715_16 euxassay_004715_17 euxassay_004715_18 euxassay_004715_19
EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642 EMAGE:7642
euxassay_004715_20 euxassay_004715_21 euxassay_004715_22 euxassay_004715_23 euxassay_004715_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7642Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7642_wholemount_strong.wlz
7642_wholemount_moderate.wlz
7642_wholemount_weak.wlz
7642_wholemount_possible.wlz
7642_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7642_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
diaphragm
moderate moderate
spottedmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
forearm rest of mesenchyme
moderate moderate
spottedmoderate expression: see section 01 23 24
upper arm rest of mesenchyme
moderate moderate
spottedmoderate expression: see section 01 02 03 20 21 22 23 24
interdigital region between forelimb digits 1 and 2
moderate moderate
spottedmoderate expression: see section 01 02 03 04 20 21 22 23 24
interdigital region between forelimb digits 2 and 3
moderate moderate
spottedmoderate expression: see section 01 02 03 04 20 21 22 23 24
interdigital region between forelimb digits 3 and 4
moderate moderate
spottedmoderate expression: see section 01 02 03 04 20 21 22 23 24
interdigital region between forelimb digits 4 and 5
moderate moderate
spottedmoderate expression: see section 01 02 03 04 20 21 22 23 24
interdigital region between hindlimb digits 1 and 2
moderate moderate
spottedmoderate expression: see section 09 10 11 12 19 20 21
interdigital region between hindlimb digits 2 and 3
moderate moderate
spottedmoderate expression: see section 09 10 11 12 19 20 21
interdigital region between hindlimb digits 3 and 4
moderate moderate
spottedmoderate expression: see section 09 10 11 12 19 20 21
interdigital region between hindlimb digits 4 and 5
moderate moderate
spottedmoderate expression: see section 09 10 11 12 19 20 21
lower leg rest of mesenchyme
moderate moderate
spottedmoderate expression: see section 01 02 03 04 05 06 07 23 24
upper leg rest of mesenchyme
moderate moderate
spottedmoderate expression: see section 03 04 05 06 07 08 09 10 11 19 20 22 23 24
vertebral axis musculature
moderate moderate
spottedmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
vibrissa
strong strong
regionalstrong expression: see section 05 06 07 08 18 19 moderate expression: see section 20
diencephalon lateral wall ventricular layer
strong strong
regionalstrong expression: see section 11 12 13 14 15
olfactory lobe
strong strong
regionalstrong expression: see section 12
telencephalon ventricular layer
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 08 09 10 11 13 14 15 16 17 18 19 20 21 22 23 24
medulla oblongata basal plate ventricular layer
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
rest of cerebellum marginal layer
strong strong
regionalstrong expression: see section 12
rest of cerebellum ventricular layer
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10 11 13 14 15 16 17 18 19 20 21 22
pons ventricular layer
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
midbrain ventricular layer
strong strong
regionalstrong expression: see section 08 09 10 11 12 13 14 15 16 17
spinal cord ventricular layer
strong strong
regionalstrong expression: see section 11 12 13 14
retina
moderate moderate
regionalmoderate expression: see section 01 02 03 04 22 23 24
anterior naris
strong strong
regionalstrong expression: see section 13 14
nasal cavity olfactory epithelium
strong strong
regionalstrong expression: see section 17 18 moderate expression: see section 08 09 10 14 15 16
tongue extrinsic muscle
moderate moderate
spottedmoderate expression: see section 09 10 11 12 13 14 15
tongue intrinsic muscle
moderate moderate
spottedmoderate expression: see section 09 10 11 12 13 14 15
stomach
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10 11 moderate expression: see section 02
rectum
strong strong
regionalstrong expression: see section 14 15
midgut
strong strong
regionalstrong expression: see section 10 11 12 13 14 15 16 17 18 19 moderate expression: see section 20 21
kidney calyx
strong strong
regionalstrong expression: see section 07 08 09 10 16 17 18 19 20
tail paraxial mesenchyme
strong strong
regionalstrong expression: see section 13 14 15 moderate expression: see section 16 17 18 19 20 21 22 23 24
Annotation Validation: spatial mapping by EMAGE editor, text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8904
Entity Detected:Dll1, delta-like 1 (Drosophila) ( MGI:104659)
Sequence:sense strand is shown

>T8904
GGGCTCTCTTCCCTCTGTGTCTTATCTCCTTTCTCCTCTTTCCCTCCGCGAAGAAGCTTAAGACAAAACC
AGAAAGCAGGAGACACTCACCTCTCCGTGGACTGAAAGCCAGACGAAGAGGAAACCGAAAGTTGTCCTTT
CTCAGTGCCTCGTAGAGCTCTTGCCGGGGACCTAGCTGAAGGCACCGCACCCTCCTGAAGCGACCTGGCC
CTGATAGCACACCTGGAGCCGAGAGACGCCTTTCCGCCAGTACTCCTCGGGTCATATAGACTTTCCTGGC
ATCCCTGGGTCTTTGAAGAAGAAAGAAAAGAGGATACTCTAGGAGAGCAAGGGCGTCCAGCGGTACCATG
GGCCGTCGGAGCGCGCTAGCCCTTGCCGTGGTCTCTGCCCTGCTGTGCCAGGTCTGGAGCTCCGGCGTAT
TTGAGCTGAAGCTGCAGGAGTTCGTCAACAAGAAGGGGCTGCTGGGGAACCGCAACTGCTGCCGCGGGGG
CTCTGGCCCGCCTTGCGCCTGCAGGACCTTCTTTCGCGTATGCCTCAAGCACTACCAGGCCAGCGTGTCA
CCGGAGCCACCCTGCACCTACGGCAGTGCTGTCACGCCAGTGCTGGGTGTCGACTCCTTCAGCCTGCCTG
ATGGCGCAGGCATCGACCCCGCCTTCAGCAACCCCATCCGATTCCCCTTCGGCTTCACCTGGCCAGGTAC
CTTCTCTCTGATCATTGAAGCCCTCCATACAGACTCTCCCGATGACCTCGCAACAGAAAACCCAGAAAGA
CTCATCAGCCGCCTGACCACACAGAGGCACCTCACTGTGGGAGAAGAATGGTCTCAGGACCTTCACAGTA
GCGGCCGCACAGACCTCCGGTACTCTTACCGGTTTGTGTGTGACGAGCACTACTACGGAGAAGGTTGCTC
TGTGTTCTGCCGACCTCGGGATGACGCCTTTGGCCACTTCACCTGCGGGGACAGAGGGGAGAAGATGTGC
GACCCTGGCTGGAAAGGCCAGTACTGCACTGACCCAATCTGTCTGCCAGGGTGTGATGACCAACATGGAT
ACTGTGACAAACCAGGGGAGTGCAAGTGCAGAGTTGGCTGGCAGGGCCGCTACTGCGATGAGTGCATCCG
ATACCCAGGTTGTCTCCATGGCACCTGCCAGCAACCCTGGCAGTGTAACTGCCAGGAAGGCTGGGGGGGC
CTTTTCTGCAACCAAGACCTGAACTACTGTACTCACCATAAGCCGTGCAGGAATGGAGCCACCTGCACCA
ACACGGGCCAGGGGAGCTACACATGTTCCTGCCGACCTGGGTATACAGGTGCCAACTGTGAGCTGGAAGT
AGATGAGTGTGCTCCTAGCCCCTGCAAGAACGGAGCGAGCTGCACGGACCTTGAGGACAGCTTCTCTTGC
ACCTGCCCTCCCGGCTTCTATGGCAAGGTCTGTGAGCTGAGCGCCATGACCTGTGCAGATGGCCCTTGCT
TCAATGGAGGACGATGTTCAGATAACCCTGACGGAGGCTACACCTGCCATTGCCCCTTGGGCTTCTCTGG
CTTCAACTGTGAGAAGAAGATGGATCTCTGCGGCTCTTCCCCTTGTTCTAACGGTGCCAAGTGTGTGGAC
CTCGGCAACTCTTACCTGTGCCGGTGCCAGGCTGGCTTCTCCGGGAGGTACTGCGAGGACAATGTGGATG
ACTGTGCCTCCTCCCCGTGTGCAAATGGGGGCACCTGCCGGGACAGTGTGAACGACTTCTCCTGTACCTG
CCCACCTGGCTACACGGGCAAGAACTGCAGCGCCCCTGTCAGCAGGTGTGAGCATGCACCCTGCCATAAT
GGGGCCACCTGCCACCAGAGGGGCCAGCGCTACATGTGTGAGTGCGCCCAGGGCTATGGCGGCCCCAACT
GCCAGTTTCTGCTCCCTGAGCCACCACCAGGGCCCATGGTGGTGGACCTCAGTGAGAGGCATATGGAGAG
CCAGGGCGGGCCCTTCCCCTGGGTGGCCGTGTGTGCCGGGGTGGTGCTTGTCCTCCTGCTGCTGCTGGGC
TGTGCTGCTGTGGTGGTCTGCGTCCGGCTGAAGCTACAGAAACACCAGCCTCCACCTGAACCCTGTGGGG
GAGAGACAGAAACCATGAACAACCTAGCCAATTGCCAGCGCGAGAAGGACGTTTCTGTTAGCATCATTGG
GGCTACCCAGATCAAGAACACCAACAAGAAGGCGGACTTTCACGGGGACCATGGAGCCGAGAAGAGCAGC
TTTAAGGTCCGATACCCCACTGTGGACTATAACCTCGTTCGAGACCTCAAGGGAGATGAAGCCACGGTCA
GGGATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAGCTCTGCAGGAGAAGAGAAGATCGCCCC
AACACTTAGGGGTGGGGAGATTCCTGACAGAAAAAGGCCAGAGTCTGTCTACTCTACTTCAAAGGACACC
AAGTACCAGTCGGTGTATGTTCTGTCTGCAGAAAAGGATGAGTGTGTTATAGCGACTGAGGTGTAAGATG
GAAGCGATGTGGCAAAATTCCCATTTCTCTTAAATAAAATTCCAAGGATATAGCCCCGATGAATGCTGCT
GAGAGAGGAAGGGAGAGGAAACCCAGGGACTGCTGCTGAGAACCAGGTTCAGGCGAAGCTGGTTCTCTCA
GAGTTAGCAGAGGCGCCCGACACTGCCAGCCTAGGCTTTGGCTGCCGCTGGACTGCCTGCTGGTTGTTCC
CATTGCACTATGGACAGTTGCTTTGAAGAGTATATATTTAAATGGACGAGTGACTTGATTCATATAGGAA
GCACGCACTGCCCACACGTCTATCTTGGATTACTATGAGCCAGTCTTTCCTTGAACTAGAAACACAACTG
CCTTTATTGTCCTTTTTGATACTGAGATGTGTTTTTTTTTTTTCCTAGACGGGAAAAAGAAAACGTGTGT
TATTTTTTTGGGATTTGTAAAAATATTTTTCATGATATCTGTAAAGCTTGAGTATTTTGTGACGTTCATT
TTTTTATAATTTAAATTTTGGTAAATATGTACAAAGGCACTTCGGGTCTATGTGACTATATTTTTTTGTA
TATAAATGTATTTATGGAATATTGTGCAAATGTTATTTGAGTTTTTTACTGTTTTGTTAATGAAGAAATT
CATTTTAAAAATATTTTTCCAAAATAAATATAATGAACTACAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6416191 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6416191 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7640 same embryo
 EMAGE:7638 same embryo
 EMAGE:7639 same embryo
 EMAGE:7637 same embryo
 EMAGE:7641 same embryo
 EurExpress:euxassay_004715 same experiment
 MGI:4824326 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS