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EMAGE:9067

Csrp1 cysteine and glycine-rich protein 1 ( MGI:88549)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067
"Pseudo-wholemount" of euxassay_019749. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_019749_01 euxassay_019749_02 euxassay_019749_03 euxassay_019749_04
EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067
euxassay_019749_05 euxassay_019749_06 euxassay_019749_07 euxassay_019749_08 euxassay_019749_09
EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067
euxassay_019749_10 euxassay_019749_11 euxassay_019749_12 euxassay_019749_13 euxassay_019749_14
EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067 EMAGE:9067
euxassay_019749_15 euxassay_019749_16 euxassay_019749_17 euxassay_019749_18 euxassay_019749_19
EMAGE:9067
euxassay_019749_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9067Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9067_wholemount_strong.wlz
9067_wholemount_moderate.wlz
9067_wholemount_weak.wlz
9067_wholemount_possible.wlz
9067_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9067_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56076
Entity Detected:Csrp1, cysteine and glycine-rich protein 1 ( MGI:88549)
Sequence:sense strand is shown

>T56076
CCTGCTTCCTGTGTATGGTCTGCAAGAAAAATCTGGACAGCACCACTGTGGCAGTGCATGGAGAAGAGAT
CTATTGCAAGTCATGTTACGGCAAGAAGTACGGGCCAAAAGGCTACGGCTACGGGCAGGGCGCAGGCACG
CTGAGCACAGACAAGGGGGAGTCTCTGGGCATCAAGCATGAGGAAGCCCCTGGACACAGGCCCACCACCA
ACCCCAATGCATCCAAGTTTGCCCAGAAGATTGGCGGCTCTGAGCGCTGTCCCCGCTGTAGCCAGGCGGT
CTATGCTGCGGAGAAGGTGATCGGTGCAGGGAAGTCCTGGCATAAGTCCTGCTTCCGATGTGCCAAGTGT
GGCAAAGGCCTTGAGTCGACCACCCTGGCAGACAAGGATGGTGAGATCTACTGTAAAGGATGCTATGCCA
AAAACTTTGGGCCCAAAGGTTTTGGCTTTGGACAGGGAGCTGGAGCCTTGGTTCACTCAGAGTGAGGCTG
CCACCGCCTGCGCACCCTGCTTACTCCTAAGCTTTTCATCAGCGGTCCATTCCCAAGCCTTGGACACCTC
CGAGCTCCTCTCCCTCACTCAGCCCCGCTGCACATCACTAATGCCTTGGACTTGGGTATCTGGCTTTTTG
TGGCTCAGGGATCTGCCTGAGCTCCTTCCCCACGAAGGGTTTCCTCCTGCCTGGCATTTGATACCATTAC
CTTTAGGAGACATCTGTCTAGTCGCCCCTTTCCAGAGACCAGGTCCCTTTCCCCACACCTCACCCTCCAC
AGACCTCTGTTTCTAGGCTGAATGTCCACTCTCTACTGGCCAGGACACCTGAGCCCACATCTTTGGAGAC
CAATAGAGCAAAGCAGGAGACCTGGGGCAGGGAGGCAGGACCAGAATTGGCCTAGGGAGGGTTATGGTTT
TTGGGTCCCAGAGAGTCTCCTCTGGGTAGGCGGCTGAGTTCTTGGTGTATCTCAGTCTGGGAAGTCTCCA
TGAGAGGCAGGGAGGTGCAGATAGGATTGTGGGCCATCGGAAGGAGCTCTTTCTCTGGCCCTTGCCTTTG
AATGTGGAAATAGTATCTTATCACTTAGGAATGGAGAACAAGCCAGTTCAGAGGACCCCAAAGTCTAGAG
ATTGCCTGACCTCCTTAGGCATCAAG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:CCTGCTTCCTGTGTATGGTCTGC; Reverse Primer - name:unspecified, sequence:CTTGATGCCTAAGGAGGTCAGGC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019749 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS