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EMAGE:9643

Gne glucosamine ( MGI:1354951)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643
"Pseudo-wholemount" of euxassay_018552. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018552_01 euxassay_018552_02 euxassay_018552_03 euxassay_018552_04
EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643
euxassay_018552_05 euxassay_018552_06 euxassay_018552_07 euxassay_018552_08 euxassay_018552_09
EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643
euxassay_018552_10 euxassay_018552_11 euxassay_018552_12 euxassay_018552_13 euxassay_018552_14
EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643
euxassay_018552_15 euxassay_018552_16 euxassay_018552_17 euxassay_018552_18 euxassay_018552_19
EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643 EMAGE:9643
euxassay_018552_20 euxassay_018552_21 euxassay_018552_22 euxassay_018552_23 euxassay_018552_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9643Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9643_wholemount_strong.wlz
9643_wholemount_moderate.wlz
9643_wholemount_weak.wlz
9643_wholemount_possible.wlz
9643_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9643_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50451
Entity Detected:Gne, glucosamine ( MGI:1354951)
Sequence:sense strand is shown

>T50451
TGCTGCCTTGATGAACATCCGCATCCTTCACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATGACTCT
ATCAGACACGCCATAACAAAACTGGCTCACTACCATGTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGA
TCTCTATGTGCGAGGACCACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTATGACAAACTGCTCTCCGC
CAAGAACAAAGACTATATGAGCATCATTCGGATGTGGCTAGGCGATGATGTAAAATGTAAGGATTACATC
GTTGCCCTGCAGCATCCCGTGACCACTGACATTAAGCATTCCATAAAGATGTTTGAGCTAACACTGGATG
CCCTGATCTCGTTTAACAAGAGGACCCTAGTTCTGTTTCCAAATATCGATGCAGGCAGCAAGGAGATGGT
TCGAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGCAGTCAAGCACGTCCCGTTTGAC
CAGTTCATACAGCTGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCAGCTGCGGCGTGCGAGAGGTTG
GCGCTTTCGGAACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCT
TCATGTCAGGGATGCTGACACCCAAGATAAAATATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTAC
CCTTGCTCAAAGATATATGGGGATGGGAATGCTGTTCCAAGGATTTTAAAGTTTCTCAAATCCATTGACC
TTCAAGAGCCACTACAGAAGAAATTCTGCTTCCCCCCTGTAAAGGAGAACATCTCTCAAGACATTGACCA
CATCCTGGAAACTCTGAGTGCCTTGGCTGTTGATCTTGGCGGGACAAACCTGAGGGTGGCAATAGTTAGC
ATGAAGGGTGAAATCGTT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:TGCTGCCTTGATGAACATCC; Reverse Primer - name:unspecified, sequence:AACGATTTCACCCTTCATGC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9641 same embryo
 EMAGE:9640 same embryo
 EMAGE:9642 same embryo
 EMAGE:9639 same embryo
 EurExpress:euxassay_018552 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS