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EMAGE:5321

Cass4 Cas scaffolding protein family member 4 ( MGI:2444482)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5321
FigS2left. [doi:10.1371/journal.pgen.0030080] [PMID:17530927] Copyright: This image is from Lu et al., PLoS Genet 2007 May 3(5):e80, an open-access article distributed under the terms of the Creative Commons Attribution License

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Editors Note: The apparent signal in the anterior neural tube is not discussed by the authors. It bears resemblance to the common artifact due to reagent trapping and therefore has been spatially annotated as 'possible' expression.
Expression Pattern Description
Spatial Annotation:
EMAGE:5321Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5321_wholemount__possible.wlz
5321_wholemount__notDetected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5321_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future spinal cord
not detected not detected
homogeneous
metanephric mesenchyme
not detected not detected
homogeneousExpression is not detected in the kidney.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3720462
Entity Detected:Cass4, Cas scaffolding protein family member 4 ( MGI:2444482)
Notes:The Cass4 (C20orf32) probe used in this study by Lu et al., 2007 [PMID:17530927] is described as "cRNA probe complementary to the 3'-UTR of C20orf32."
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Lu W; Quintero-Rivera F; Fan Y; Alkuraya FS; Donovan DJ; Xi Q; Turbe-Doan A; Li QG; Campbell CG; Shanske AL; Sherr EH; Ahmad A; Peters R; Rilliet B; Parvex P; Bassuk AG; Harris DJ; Ferguson H; Kelly C; Walsh CA; Gronostajski RM; Devriendt K; Higgins A; Ligon AH; Quade BJ; Morton CC; Gusella JF; Maas RL, 2007 [PMID:17530927] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1371/journal.pgen.0030080] [ PMID:17530927] Lu W, Quintero-Rivera F, Fan Y, Alkuraya FS, Donovan DJ, Xi Q, Turbe-Doan A, Li QG, Campbell CG, Shanske AL, Sherr EH, Ahmad A, Peters R, Rilliet B, Parvex P, Bassuk AG, Harris DJ, Ferguson H, Kelly C, Walsh CA, Gronostajski RM, Devriendt K, Higgins A, Ligon AH, Quade BJ, Morton CC, Gusella JF, Maas RL 2007 NFIA haploinsufficiency is associated with a CNS malformation syndrome and urinary tract defects. PLoS Genet (3):e80
Links:MGI:3720476 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI