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EMAGE:5886

Aif1l allograft inflammatory factor 1-like ( MGI:1919598)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5886
Figure 3G. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2003.11.024] Dev Biol 268: 24-38 , Powles N; Babbs C; Ficker M; Schimmang T; Maconochie M, Identification and analysis of genes from the mouse otic vesicle and their association with developmental subprocesses through in situ hybridization. Copyright 2004 [PMID:15031102]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5886Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5886_wholemount__moderate.wlz
5886_wholemount__possible.wlz
5886_wholemount__notDetected.wlz
5886_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5886_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
otocyst
detected detected
regionalOtic vesicle; ventral and/or anteroventral restricted expression.
endolymphatic appendage
detected detected
Endolymphatic duct.
acoustic viii ganglion
detected detected
Neuroblast/VIII ganglion.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3510003
Entity Detected:Aif1l, allograft inflammatory factor 1-like ( MGI:1919598)
Notes:The Aif1l probe used in this study by Powles et al., 2004 [PMID:15031102] was generated from clone np325, the insert of which is of unreported sequence. The authors do state however that this clone is identical in part or all of its sequence to BC024599 and give the UniGene cluster Mm.24838 (Allograft inflammatory factor 1-like) as an identifier.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:involves: C57BL/6 * CBA
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Powles N; Babbs C; Ficker M; Schimmang T; Maconochie M, 2004 [PMID:15031102] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.ydbio.2003.11.024] [ PMID:15031102] Powles N, Babbs C, Ficker M, Schimmang T, Maconochie M 2004 Identification and analysis of genes from the mouse otic vesicle and their association with developmental subprocesses through in situ hybridization. Dev Biol (268):24-38
Links:MGI:3510339 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI