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EMAGE:639

Snai1 snail homolog 1 (Drosophila) ( MGI:98330)
TS11 (7.5 dpc)
in situ hybridisation

Data Images
EMAGE:639
Figure 2H of Sefton et al., 1998 [PMID:9671584] Copyright: This image is from Development and is displayed with the permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: al - allantois; em - early mesoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:639Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
639_wholemount_strong_3D_1.wlz
639_wholemount_weak_3D_1.wlz
639_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:639_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo mesoderm
strong strong
mSna expression is particularly strong in the mesoderm as it migrates from the primitive streak.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1328416
Entity Detected:Snai1, snail homolog 1 (Drosophila) ( MGI:98330)
Sequence:sense strand is shown

>MGI:1328416
AGCTGGCCAGGCTCTCGGTGGCCAAGGACCCCCAGTCGCGGAAGATCTTCAACTGCAAATATTGTAACAA
GGAGTACCTCAGCCTGGGCGCTCTGAAGATGCACATCCGAAGCCACACGCTGCCTTGTGTCTGCACGACC
TGTGGAAAGGCCTTCTCTAGGCCCTGGCTGCTTCAGGGCCACGTCCGCACCCACACTGGTGAGAAGCCAT
TCTCCTGCTCCCACTGCAACCGTGCTTTTGCTGTCCGCTCCAACCTGCGTGCCCACCTCCAAACCCACTC
GGATGTGAAGAGATACCAGTGCCAGGCCTGTGCCCGAACCTTCTCCCGCATGTCCTTGCTCCACAAGCAC
CAAGAGTCTGGCTGCTCCGGAGGCCCTCGCTGACCCAGCTAC
nt 433 - nt 824 of X67253.1
Notes:The Snai1 (mSna) probe used in this study by Sefton et al., 1998 [PMID:9671584] is described as "nucleotides 433-824". X67253 is mentioned in Fig1 therein as the sequence of mSna.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:BALB/c or SJL
Age:7.5 dpc
Theiler Stage:TS11
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Sefton et al., 1998 [PMID:9671584] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9671584] Sefton M, Sanchez S, Nieto MA 1998 Conserved and divergent roles for members of the Snail family of transcription factors in the chick and mouse embryo. Development (125):3111-21
Links:MGI:1328418 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI