A tiled value table for both 2 an 3D domain objects. Typedef: WlzTiledValues. More...

Data Fields
WlzObjectType	type

int	linkcount

void *	freeptr

WlzValues	original_table

int	dim

int	kol1

int	lastkl

int	line1

int	lastln

int	plane1

int	lastpl

WlzPixelV	bckgrnd

unsigned int	vRank

unsigned int *	vDim

unsigned int	vpe

size_t	tileSz

size_t	tileWidth

size_t	numTiles

int *	nIdx

unsigned int *	indices

int	fd

long	tileOffset

WlzGreyP	tiles

Detailed Description

A tiled value table for both 2 an 3D domain objects. Typedef: WlzTiledValues.

Individual pixel/voxel values may contain a single (scalar) value of a multidimensional array of values. When an array of values is used the values are held contiguously.

The grey values are stored in square or cubic tiles with tileSz being the number of values in each tile irrespective of the grey value type. An index to the tiles is stored as a simple one dimensional array.

To access a grey value at some position \((x,y,z)\) which is known to be within the tiled value table: First the position relative to the first column ( \(x_0\)), line ( \(y_0\)) and plane ( \(z_0\))of the value table is computed: \(x_r = x - x_0, y_r = y - y_0, z_r = z - z_0\). The tile index ( \(i\)) and within tile offset ( \(o\)) are then computed:

\begin{eqnarray*} i_x = x_r / w \\ i_y = y_r / w \\ i_z = z_r / w \\ o_x = x_r - (w i_x) \\ o_y = y_r - (w i_y) \\ o_z = z_r - (w i_z) \\ i = (((i_z ni_y) + i_y) ni_x) + i_x \\ o = (((o_z nt_y) + o_y) nt_x) + o_x \\ g = T \left[ ( I \left[ i \right] t_s) + o \right] \end{eqnarray*}

Where \(I\) is the index table and \(T\) the start of the tile data.

    The tile data may be memory mapped instead of read into
    memory in which case the file descriptor will have a
    non-negative value. This can be used to close the file.

    A memory mapped tiled values object can only have it's
    grey values changed if the file was opened for writing
    attempting to change the grey values of an object only
    opened for read will lead to a memory fault. The read/write
    status is respected by the interval scanning access function
    WlzNextGreyInterval(), but code which uses random access
    via WlzGreyValueGet() or sequential access via WlzIterate()
    should check this. Attempting to write to the memory mapped
    values of an object only opened for reading will give a
    segmentation fault. A tiled values object can be written
    to only if the file descriptor is invalid (< 0) or if
    the file was opened in write or append mode. The function
    WlzTiledValuesMode() may also be used to determine the
    appropriate access mode(s) for the values table.

Field Documentation

WlzObjectType _WlzTiledValues::type

From WlzCoreValues: built from WLZ_GREY_TAB_TILED and the grey value type.

Referenced by WlzEndGreyScan(), WlzFreeTiledValues(), WlzMakeTiledValueBuffer(), WlzMakeTiledValues(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzMakeTiledValuesTiles(), WlzNewTiledValues(), WlzReadObj(), WlzTiledValuesCopyLine(), WlzTiledValuesMode(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::linkcount

From WlzCoreValues.

Referenced by WlzFreeTiledValues(), WlzReadObj(), and WlzWriteMeshTransform3D().

void* _WlzTiledValues::freeptr

From WlzCoreValues, although this won't free the values themselves.

WlzValues _WlzTiledValues::original_table

If non-NULL, the values table which owns the raw values we are using.

Referenced by WlzFreeTiledValues(), WlzGetSubSectionFromObject(), and WlzNewTiledValues().

int _WlzTiledValues::dim

The dimension of the value table, ie 2 or 3D.

Referenced by WlzDGTensorFeatures(), WlzGreyInterval(), WlzMakeTiledValues(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzReadObj(), WlzTiledValueBufferFill(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::kol1

First column.

Referenced by WlzGetSubSectionFromObject(), WlzGreyInterval(), WlzGreyValueGetDir(), WlzMakeTiledValueBuffer(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzShiftValues(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::lastkl

Last column.

Referenced by WlzMakeTiledValueBuffer(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzShiftValues(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::line1

First line.

Referenced by WlzGetSubSectionFromObject(), WlzGreyInterval(), WlzGreyValueGetDir(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzShiftValues(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::lastln

Last line.

Referenced by WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzShiftValues(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::plane1

First plane.

Referenced by WlzGetSubSectionFromObject(), WlzGreyInterval(), WlzGreyValueGetDir(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzShiftValues(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

int _WlzTiledValues::lastpl

Last plane.

Referenced by WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzShiftValues(), WlzTiledValuesCopyLine(), and WlzWriteMeshTransform3D().

WlzPixelV _WlzTiledValues::bckgrnd

Background value.

Referenced by WlzGetBackground(), WlzGreyValueMakeWSp(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzMakeTiledValuesTiles(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzTiledValueBufferFill(), and WlzWriteMeshTransform3D().

unsigned int _WlzTiledValues::vRank

The rank of the individual values. Here the rank for a scalar is 0, for a 1D array it is 1 and for and for individual values that are nD arrays the rank is n. The rank will only ever be > 0 when the grey table type is composed using rank > 0.

Referenced by WlzDGTensorFeatures(), WlzFreeTiledValues(), WlzMakeTiledValues(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzMakeTiledValuesTiles(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzTiledValuesValPerElm(), and WlzWriteMeshTransform3D().

unsigned int* _WlzTiledValues::vDim

The dimensions of individual values. The dimensions are a 1D array with the number of entries equal to the rank. A dimension array is only allocated if the rank > 0, for rank == 0 dim is NULL.

Referenced by WlzDGTensorFeatures(), WlzFreeTiledValues(), WlzFromArray1D(), WlzMakeTiledValues(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzNewTiledValues(), WlzObjectFacts(), WlzReadObj(), WlzTiledValuesValPerElm(), and WlzWriteMeshTransform3D().

unsigned int _WlzTiledValues::vpe

Values per element which has the value \( \prod_i^\textrm{vRank}{\textrm{vDim}[i]} \) as compulted by WlzTiledValuesValPerElm() (value 1 when vRank = 0) is included since it is frequently used.

Referenced by WlzCopyObjectGreyValues(), WlzFreeTiledValues(), WlzGetSubSectionFromObject(), WlzGreyValueGetDir(), WlzMakeTiledValueBuffer(), WlzMakeTiledValuesObj2D(), WlzMakeTiledValuesObj3D(), WlzMakeTiledValuesTiles(), WlzNewTiledValues(), WlzReadObj(), WlzTensorGetComponent(), WlzTensorSetComponent(), WlzTensorSmooth(), WlzTiledValueBufferFill(), WlzTiledValueBufferFlush(), and WlzTiledValuesCopyLine().