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| Query EMAGE entries |
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- This group of searches return a table where each row is a summary of an EMAGE entry.
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- Use a gene/protein name, symbol or ID as query term.
- MGI, Entrez, Ensembl, VEGA, UniGene, RefSeq, GenBank, SwissProt IDs supported.
- The search can be filtered by expression strength and Theiler stage.
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- Use an embryonic region as query term.
- Paint your query region using our on-line interface.
- The search can be filtered by expression strength and Theiler stage.
- Genes with spatially similar expression patterns to the query region are returned.
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- Use the name of an anatomical structure (e.g. "brain", "eye") as query term.
- The search can be filtered by expression strength.
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- Search the EMAGE database using a combination of query terms.
- Search fields include gene, anatomy name, ID, stage, GO term, assay type etc.
- Build up a query step-by-step.
- Choose to include or exclude query terms.
- Auto-suggestion of query terms as you type.
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| Browse Gene and Pathway summaries |
- Gene summary and gene association searches return a table where each row is a summary of expression for a gene at one Theiler stage.
- Pathway search returns a table where each row is a summary of expression for a biological pathway.
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- Search for expression patterns summarised at gene and stage.
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- Search for gene expression in biological pathways.
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- Search for associations between genes.
- Results are summarised at gene and stage.
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| Analysis Tool |
- Additional tools to search and analyse EMAGE data.
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- Search EMAGE using computational methods:
- JSON, Webservices, URL
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- Hierarchically cluster gene expression data based on the spatial similarities between the patterns.
- Find genes with globally similar patterns of expression (i.e. synexpression groups).
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